Gene Tgr7_1412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1412 
Symbol 
ID7315121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp1512656 
End bp1513270 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content62% 
IMG OID643616302 
Productcold-shock DNA-binding domain protein 
Protein accessionYP_002513484 
Protein GI220934585 
COG category[S] Function unknown 
COG ID[COG3326] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGCAA AGGGAAGAAT TTATGACTGG AAGGATGATC GCGGTTTCGG CTTCATCAGG 
CCGAATGTGG GGGGCAAGGA GGTCTTTGTC CATATCCGGT CCTTCAACAA TCGAACCCGA 
AGACCCGTCA GGAATGAGAT CGTGACCTAC GACCTGGTCA TCGATGACCA GGGTCGGCCG 
AGGGCGGAGA AGGTCGCATT TGCCGGGGAG CGCGTTGCCA TGGGCACCCC GGCCAGGCGG 
GTGACGGCGC CTCTGGTGTT TGCCGGGGTG TTCCTGTCCT TGGTCACGGT GAGCGTCCTG 
GTCGGCCTGT TGCCGGTCAT CCTGCTGGTC TGGTACCTGG CCGCCTGTCT GGTGACCTTT 
TCCGCCTATG CCCTGGACAA GTCGGCCGCC CGGCAGGGCA GGTGGCGCAC CCAGGAAAGC 
ACCCTTCATT TGTTTTCCCT GGCGGGCGGC TGGCCAGGCG CCCTGATGGC CCAGCAGCGC 
TTGCGTCACA AGTCCAGGAA GCAGCCGTTC CAGACGGTGT TCTGGCTGAC AGTCCTGCTT 
AACTGCGTGG CGTTGGGCTG GCTCTTGTCC CCCATGGGCA ATGAGCTTCT TAAGGTCATA 
GCCGCCTTGC CCTGA
 
Protein sequence
MRAKGRIYDW KDDRGFGFIR PNVGGKEVFV HIRSFNNRTR RPVRNEIVTY DLVIDDQGRP 
RAEKVAFAGE RVAMGTPARR VTAPLVFAGV FLSLVTVSVL VGLLPVILLV WYLAACLVTF 
SAYALDKSAA RQGRWRTQES TLHLFSLAGG WPGALMAQQR LRHKSRKQPF QTVFWLTVLL 
NCVALGWLLS PMGNELLKVI AALP