| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1411 |
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| Symbol | |
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| ID | 7315120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1511461 |
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| End bp | 1512498 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643616301 |
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| Product | tRNA pseudouridine synthase D TruD |
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| Protein accession | YP_002513483 |
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| Protein GI | 220934584 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACAC CCGCCACAGC ACCACCACTC TTCCAGGCGC GCATCCGCAC CCGCCCCGAG
GACTTCATCG TCGAGGAGCT CTCCGCCGCT GATCCCGATG GCCAGGGTGA GCATGTCTGG
GTGTTGCTGG AGAAGACCGG CTGCAACACC GAACACGCCG CCCGTTGCCT GGCCCGTGCA
GCCAACGTAT CCCGCAGCGC CGTGGGCTAT GCCGGCCTCA AGGACCGCCA CGCCGTCACC
ACCCAGTGGT TCAGCGTCCA GCTCCCCGGC AAGGACGCCC CCGACTGGTC CGCCCAGCTC
GGCCCCGAGT TCAGGGTCCT GCGCTCAGAA CGTCACAGCC GCAAGCTCAA GACCGGCTAC
CTCCTGGGCA ACCGCTTCCG CCTGACCCTG CGCGAGTGCC GCGGCGATCG CGCCGGTCTG
GAACAGCGCC TCGAGCAGAT CCGCGGCCAC GGCGTGCCCA ACTACTTCGG CCCGCAACGC
TTCGGCCGGG AGGGCGCCAA CCTGGACAAG GCCCGCGCCA TGTTCGAGGG CAAGATGCGA
GTGCGCGACA GGAAGCTGGC CGGTCTCTAT CTCTCCGCCG CCCGCTCCGA GCTGTTCAAC
CGGGTGCTGG CCCGTCGCGT GGAACAGGGC AACTGGTGCC GGGCCCTGCC CGGGGACGTG
ATGACCCTGG ACGGCAGCCG CAGCCATTTC CTGGCCGAGG CCGTGGACGC GGCTCTGGAA
GGGCGGGTTC GCATCGGTGA CGTGCATCCC AGCGGACCGC TGTGGGGCAA GGGGGAGCTG
GCGACCCGCG GCGAAGTGGC TGCACTTGAA CAGGCCGTGG CAGAGGCTGA GCCGGTGTTC
GCCCAGGGTC TCGCCCAGGC CGGGCTCAAA CAGGAGCGGC GCGCACTGCG CATGAGGGTG
AACGGCTTGA GCCATCAATG GCTCGACGAG GAAACCCTGG TGCTGGCGTT CGAGCTGCCT
CCGGGTGGCT ACGCGACCAT GGTGCTGGCG GAGATCGCGG CGGTGGTGGA TGCGGGCACG
GGGGCGATGG AGGAGTAG
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| Protein sequence | MTTPATAPPL FQARIRTRPE DFIVEELSAA DPDGQGEHVW VLLEKTGCNT EHAARCLARA
ANVSRSAVGY AGLKDRHAVT TQWFSVQLPG KDAPDWSAQL GPEFRVLRSE RHSRKLKTGY
LLGNRFRLTL RECRGDRAGL EQRLEQIRGH GVPNYFGPQR FGREGANLDK ARAMFEGKMR
VRDRKLAGLY LSAARSELFN RVLARRVEQG NWCRALPGDV MTLDGSRSHF LAEAVDAALE
GRVRIGDVHP SGPLWGKGEL ATRGEVAALE QAVAEAEPVF AQGLAQAGLK QERRALRMRV
NGLSHQWLDE ETLVLAFELP PGGYATMVLA EIAAVVDAGT GAMEE
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