Gene Tgr7_1405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1405 
Symbol 
ID7315114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp1502391 
End bp1503785 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content66% 
IMG OID643616295 
Productdiguanylate cyclase 
Protein accessionYP_002513477 
Protein GI220934578 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGAAC AACAGGGCGA GGCCGGCTGG CTGATCCAGA GACTCACCCT GGCCTACCAT 
CGCCTGCTCA TCGCCGGCTT CGCCCTGACG CCGCTCATTG CCATCGCCTA CGTCTACAGC
TTCCAGGATC CGGCGCTGCG CTTCGAGCAC CACCTGTTCC ACGAGGTGGC CATCGGCATC
GCCATCGCCC TGAGTGCCTT CGCCACCTAC GTTACCTGGC GCTGCTACCG GGCCTCGGGT
GAGGTCTTCC TGCGCTGGCT GGCCCTGGGC TTTCTGGGCT TCACCGTCAT CTACCTGCCC
CACGGCTTTC TCACCCGTAT CGTGGACGAA GGGCTGGCGC TGTTCCTGAT CTTCGGACCC
GCCTCGAGGC TGGTGATGGC CGCCTGTTTC TTCATCGCCC TGCTGCGCTA CCGCGCGCTG
CCCGATGTCC TGCCGGTGCG CTGCCGGTAT CAATTCTGGC TGGCAGGGCT GGGGGTGTTC
ATGCTCATCA TGGGGATTGC CGCTTACCTC GGCCAGCTGC CCTGGGCGCA GGCTCGTCCC
GTGCTCGTGG GCCTGGAGAC CGGGGCCATG TTGCTGTCCC TGGCCGGCAT CCTGGTCATG
GCGGTGCTGC GTACCCGTTC TCCCCTGATG ACCGTCTACA TGGTCTCTCT GGCGGTCTTC
GCCCAGGCCT CCCTTGCATT CCTGCTCGCC ACCCCCTGGA ACCACCTGTG GTGGCTGGGC
CATGGCATCT TTGCGGCCGG TTTCTTCATG CTCAGCTACG GCATCGTGCA GGCCTTCCAC
ACCACCCGGT CCTTTTCCAC GGTCTACAGC CAGATGGACA TGATGGCGCA GCTGCGCGAG
CAGCAGGCCT GGACCCAGGA GGCCCTGCTG CAGGTCCAGG AGGCCAACCG CAAGCTTGAA
CAACTGGCCT CCACCGATGC GCTCACCGGC GTGGCCAACC GGCGTCAGCT GGTGGAACGG
GCCGACATGG AGGTGCCCAG GTCAGAGCGC CATGGTGCGC CGCTGTCGCT GCTGTGCCTG
GATCTGGATC ACTTCAAGCG CATCAACGAC GACTACGGCC ATCTGGCCGG GGATGAGGTC
CTCAAGCAGG TGGCCGAGGC GATCCAGCAG AGCCTTCGCC CCTCCGACCT GCTGGCCCGT
GTGGGCGGCG AGGAGTTTCA TGTGTTGCTG CCGGACACGG ACCTGGCGGG CGCCAGGGAC
GTGGCCGAAC GCATCCGGGT GAAACTGGAG GGCCTGGATA TCCCGGTGCA GGGGGTGGTG
CTGCACGTCA CCGTCAGTGT GGGCTGCGCG CAGCTGGGGC CGGACGGCGC GGACATGAAG
TCGCTGACCC ACACGGCGGA CGAGCGGCTC TACCAGGCGA AGGCGCTGGG CAGGAATCGG
GTGGTGATCG CCTAG
 
Protein sequence
MDEQQGEAGW LIQRLTLAYH RLLIAGFALT PLIAIAYVYS FQDPALRFEH HLFHEVAIGI 
AIALSAFATY VTWRCYRASG EVFLRWLALG FLGFTVIYLP HGFLTRIVDE GLALFLIFGP
ASRLVMAACF FIALLRYRAL PDVLPVRCRY QFWLAGLGVF MLIMGIAAYL GQLPWAQARP
VLVGLETGAM LLSLAGILVM AVLRTRSPLM TVYMVSLAVF AQASLAFLLA TPWNHLWWLG
HGIFAAGFFM LSYGIVQAFH TTRSFSTVYS QMDMMAQLRE QQAWTQEALL QVQEANRKLE
QLASTDALTG VANRRQLVER ADMEVPRSER HGAPLSLLCL DLDHFKRIND DYGHLAGDEV
LKQVAEAIQQ SLRPSDLLAR VGGEEFHVLL PDTDLAGARD VAERIRVKLE GLDIPVQGVV
LHVTVSVGCA QLGPDGADMK SLTHTADERL YQAKALGRNR VVIA