| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1405 |
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| Symbol | |
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| ID | 7315114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1502391 |
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| End bp | 1503785 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643616295 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002513477 |
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| Protein GI | 220934578 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGAAC AACAGGGCGA GGCCGGCTGG CTGATCCAGA GACTCACCCT GGCCTACCAT
CGCCTGCTCA TCGCCGGCTT CGCCCTGACG CCGCTCATTG CCATCGCCTA CGTCTACAGC
TTCCAGGATC CGGCGCTGCG CTTCGAGCAC CACCTGTTCC ACGAGGTGGC CATCGGCATC
GCCATCGCCC TGAGTGCCTT CGCCACCTAC GTTACCTGGC GCTGCTACCG GGCCTCGGGT
GAGGTCTTCC TGCGCTGGCT GGCCCTGGGC TTTCTGGGCT TCACCGTCAT CTACCTGCCC
CACGGCTTTC TCACCCGTAT CGTGGACGAA GGGCTGGCGC TGTTCCTGAT CTTCGGACCC
GCCTCGAGGC TGGTGATGGC CGCCTGTTTC TTCATCGCCC TGCTGCGCTA CCGCGCGCTG
CCCGATGTCC TGCCGGTGCG CTGCCGGTAT CAATTCTGGC TGGCAGGGCT GGGGGTGTTC
ATGCTCATCA TGGGGATTGC CGCTTACCTC GGCCAGCTGC CCTGGGCGCA GGCTCGTCCC
GTGCTCGTGG GCCTGGAGAC CGGGGCCATG TTGCTGTCCC TGGCCGGCAT CCTGGTCATG
GCGGTGCTGC GTACCCGTTC TCCCCTGATG ACCGTCTACA TGGTCTCTCT GGCGGTCTTC
GCCCAGGCCT CCCTTGCATT CCTGCTCGCC ACCCCCTGGA ACCACCTGTG GTGGCTGGGC
CATGGCATCT TTGCGGCCGG TTTCTTCATG CTCAGCTACG GCATCGTGCA GGCCTTCCAC
ACCACCCGGT CCTTTTCCAC GGTCTACAGC CAGATGGACA TGATGGCGCA GCTGCGCGAG
CAGCAGGCCT GGACCCAGGA GGCCCTGCTG CAGGTCCAGG AGGCCAACCG CAAGCTTGAA
CAACTGGCCT CCACCGATGC GCTCACCGGC GTGGCCAACC GGCGTCAGCT GGTGGAACGG
GCCGACATGG AGGTGCCCAG GTCAGAGCGC CATGGTGCGC CGCTGTCGCT GCTGTGCCTG
GATCTGGATC ACTTCAAGCG CATCAACGAC GACTACGGCC ATCTGGCCGG GGATGAGGTC
CTCAAGCAGG TGGCCGAGGC GATCCAGCAG AGCCTTCGCC CCTCCGACCT GCTGGCCCGT
GTGGGCGGCG AGGAGTTTCA TGTGTTGCTG CCGGACACGG ACCTGGCGGG CGCCAGGGAC
GTGGCCGAAC GCATCCGGGT GAAACTGGAG GGCCTGGATA TCCCGGTGCA GGGGGTGGTG
CTGCACGTCA CCGTCAGTGT GGGCTGCGCG CAGCTGGGGC CGGACGGCGC GGACATGAAG
TCGCTGACCC ACACGGCGGA CGAGCGGCTC TACCAGGCGA AGGCGCTGGG CAGGAATCGG
GTGGTGATCG CCTAG
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| Protein sequence | MDEQQGEAGW LIQRLTLAYH RLLIAGFALT PLIAIAYVYS FQDPALRFEH HLFHEVAIGI
AIALSAFATY VTWRCYRASG EVFLRWLALG FLGFTVIYLP HGFLTRIVDE GLALFLIFGP
ASRLVMAACF FIALLRYRAL PDVLPVRCRY QFWLAGLGVF MLIMGIAAYL GQLPWAQARP
VLVGLETGAM LLSLAGILVM AVLRTRSPLM TVYMVSLAVF AQASLAFLLA TPWNHLWWLG
HGIFAAGFFM LSYGIVQAFH TTRSFSTVYS QMDMMAQLRE QQAWTQEALL QVQEANRKLE
QLASTDALTG VANRRQLVER ADMEVPRSER HGAPLSLLCL DLDHFKRIND DYGHLAGDEV
LKQVAEAIQQ SLRPSDLLAR VGGEEFHVLL PDTDLAGARD VAERIRVKLE GLDIPVQGVV
LHVTVSVGCA QLGPDGADMK SLTHTADERL YQAKALGRNR VVIA
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