| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1395 |
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| Symbol | |
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| ID | 7315104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 1492979 |
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| End bp | 1493725 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643616285 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002513467 |
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| Protein GI | 220934568 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.164704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGCA CCGCACTGAT CACCGGCGCC GCCGGCGGAC TCGGCCAGGC CGCCACCACC
ATGCTGCAGT CCCGGGGCTG GCGGGTGGCC GGCGTGAGCC GGGATGCCGC GCGCCTGTCC
GGCACATCCG AGCAGTTCCT GCCTATCCAG GCCGACGTCT CCACCGGCGC GGGCGCGGAG
CAGGCGCTCG CCGCCTGCAT GGAGGCCTTC GGCGCACCGC CCGATGCCCT GATCCACGCC
GTGGGCAGCA CCCTGCTCGC GCCCCTGCAC CGCACCGACG AGGACACCTA TCGCCAGACA
CTGGCCGCCA ACCTGGACAG CGCCTTCTTC ACCCTGCGCG CCTATGTGCA GGCGGCGCTG
AAGGCGAAAC GGCCCGGCAA GGTGGTCCTG GTCAGCTCCG TGGTGGCCCG GGTGGGTGTC
TCCAACCACG AGGCCATCGC CATGGCCAAG GGTGGCATCG AGGCCCTGGT ACGCTCGGCG
GCCGCCACCT ATTCCCCCCA GGGCATCCGC ATCAACGCCA TCGCCCCGGG CCTGACCCGC
ACGCCGGCCA CGGAACGCCT GTTCTCGGCC CAGACGGCGG AGGAGCAGAT TCGCGCCCAG
TATCCCCTGG GCCGCTACGG CGCCGCCGAG GACCTGGCCC GGGCCGCCTG CTGGCTGGTC
TCCGAGGAGG CCGACTGGAT CACCGGACAG GTGCTGCCCG TGGACGGCGG CTTCACCGCC
GTGCGCCCCA TGGTGAGGGC CCGGTGA
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| Protein sequence | MTRTALITGA AGGLGQAATT MLQSRGWRVA GVSRDAARLS GTSEQFLPIQ ADVSTGAGAE
QALAACMEAF GAPPDALIHA VGSTLLAPLH RTDEDTYRQT LAANLDSAFF TLRAYVQAAL
KAKRPGKVVL VSSVVARVGV SNHEAIAMAK GGIEALVRSA AATYSPQGIR INAIAPGLTR
TPATERLFSA QTAEEQIRAQ YPLGRYGAAE DLARAACWLV SEEADWITGQ VLPVDGGFTA
VRPMVRAR
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