| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1389 |
|---|
| Symbol | |
|---|
| ID | 7316566 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 1487116 |
|---|
| End bp | 1487889 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643616279 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002513461 |
|---|
| Protein GI | 220934562 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3496] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACACCG CCCAGCCCGC AGCACGCATC TATCACACGC AGGTGATGCA CCAGCGTCGT
TTCCCCGTGG GTTATCGCTT CGTGTACCCG GTGTTCAGCC TGCTGCTGGA CATCGACCGT
CTGGATGAGA CCAGCCGGAA ATCACGCCTG TTCTCCTTCG AGCGCTTCAA CCTGCTGAGC
GTGCGCACCA GGGATCACGG ACCCCGGGAC GGCAGCCCCT GGCGCCCCTG GGTGGAGGCG
AAGCTCGCGG AACACGGCAT CCGCCTGGAC GGCGGGACGA TCCGGCTGTT GTGCATGCCC
CGGGTGCTGG GTTACGCGTT CAACCCCCTG AGCGTGTGGT TCTGCCATCA CCGCGACGGC
AGCCTGCGCG CGGTGATCTG CGAGGTGAGC AACACCTTCG GCGAACACCA CCACTACCTG
CTGCACGAGG CGGGCCGGCC CATGCAGAGC CCGGTGCGGC AGCAGCGGGA CAAGATCTTC
CACGTCTCGC CGTTCATCGA CATGGACGCC GAGTACCGTT TCCGCATCTC CGTGCCCGAC
GAGAAGCTGC GGGTGCTGAT CCACGAATAC CAGCAGGGCG AACTGATGCT GGTCGCCACC
CAGACCGGCG AGGCACGCCC GTTCACCGAC GCACAGCTGC TGCGCACCTG GCTGCGCATG
CCGCTGATGA CCTTCAAGGT CATCACCATG ATCCACTGGC AGGCCCTGAA GATCTGGCTC
AAGGGCGCCC GATACCACAG CAAGCCCGCC CCGCCCCGAG AGGAGATGTC CTGA
|
|---|
| Protein sequence | MNTAQPAARI YHTQVMHQRR FPVGYRFVYP VFSLLLDIDR LDETSRKSRL FSFERFNLLS
VRTRDHGPRD GSPWRPWVEA KLAEHGIRLD GGTIRLLCMP RVLGYAFNPL SVWFCHHRDG
SLRAVICEVS NTFGEHHHYL LHEAGRPMQS PVRQQRDKIF HVSPFIDMDA EYRFRISVPD
EKLRVLIHEY QQGELMLVAT QTGEARPFTD AQLLRTWLRM PLMTFKVITM IHWQALKIWL
KGARYHSKPA PPREEMS
|
|---|
| |