| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1388 |
|---|
| Symbol | |
|---|
| ID | 7317880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 1485893 |
|---|
| End bp | 1487116 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643616278 |
|---|
| Product | Cyclopropane-fatty-acyl-phospholipid synthase |
|---|
| Protein accession | YP_002513460 |
|---|
| Protein GI | 220934561 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.420857 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACGC CTTCCGACCG CGTTGCCTCC GCACTGAGCA TTCCCAAGCT GCCCCTGCCC
CTGCGCTGGC TGGTCAGCCG CCTGGGACAG CTGGAGTACG GCGAACTGAC CCTGATCGCC
GCCGATGGCA ATCGCCACAC CCTCACCGGC GAGCACACGG GTCCCTCCGC CAGCATCCAG
ATTCACCGTC CCTTGCGACT GCTGCGCCGC CTGCTCACCC GGGGCGACAT CGGTTTCGCG
GAAGGGTACA TGCAGGGGGA GTGGAGCACG CCGTGCCTGA GCGCCCTGCT CACCCTGGGC
GCCCTGAACG AGCACCGCCT GTCCGGCGTG GTCGAGGCCA ACCGGCTGAG CACCTTCATG
GGCAGGCTGC GTCACCTGAT GAACCGCAAC AGCAAGCGCG GCAGCCGGGC CAACATCTCC
TTCCACTACG ACCTGGGCAA CGAGTTCTAC AAGCTCTGGC TGGACGAGAC CATGACCTAT
TCCAGCGCCG TGTTCGCGTC CCGGGACGAG GCCCTGGAGA GTGCGCAGAC CCGCAAGTAT
CAGCGCCTGC TGGACAGCCT CGATGCCGAA CCCGGCGCGC ACATCCTGGA GATCGGTTGC
GGCTGGGGCG GCTTCGCCGA ACTGGCTGCC CGTCAGGGCT ACCGGGTCAC CGGCCTGACC
CTGTCCCGGG AGCAGCTGGA CTTCGCCCGC AAGCGCATGG AGAAAGCCGG ACTTTCCGAG
CGCGTGGACC TGCGTCTGCA GGACTACCGC GATCTGGACG AGCAGTTCGA TCACGTGGTG
TCCATCGAGA TGTTCGAGGC CGTGGGCGAG GCATACTGGC CCACCTATTT CGAGACCGTG
CAGCGGGCGC TGCGCCCGGG CGGGCGCGCC GCACTGCAGG TGATCACCAT CGACGAGGCG
GTGTTCGAGC GCTACCGCAA GGGCGCCGAT TTCATCCAGC TCTACATCTT CCCCGGCGGC
ATGCTGCCGT CGGTGGAGCG CTTCAACGCC GCGGCCGAGG CCGCGGGACT GGATGTGGGC
ACCCAGAGCT TTCACCGCCT GGACTATGCC GAGACCCTGG CCCGCTGGCA CCGCCAGGTG
ATGGCCCACG CCGACGTGCT GCCGGCGCTC GGCTACGACG AGCGTTTCCT GCGCACCTGG
CGCTACTACC TGAGCTACTG CGAGGCGGGC TTCAGGACCG GCCGCACGGA TCTGATGCAG
GCGCTTCTGC ACAAGCCGGC GTGA
|
|---|
| Protein sequence | MSTPSDRVAS ALSIPKLPLP LRWLVSRLGQ LEYGELTLIA ADGNRHTLTG EHTGPSASIQ
IHRPLRLLRR LLTRGDIGFA EGYMQGEWST PCLSALLTLG ALNEHRLSGV VEANRLSTFM
GRLRHLMNRN SKRGSRANIS FHYDLGNEFY KLWLDETMTY SSAVFASRDE ALESAQTRKY
QRLLDSLDAE PGAHILEIGC GWGGFAELAA RQGYRVTGLT LSREQLDFAR KRMEKAGLSE
RVDLRLQDYR DLDEQFDHVV SIEMFEAVGE AYWPTYFETV QRALRPGGRA ALQVITIDEA
VFERYRKGAD FIQLYIFPGG MLPSVERFNA AAEAAGLDVG TQSFHRLDYA ETLARWHRQV
MAHADVLPAL GYDERFLRTW RYYLSYCEAG FRTGRTDLMQ ALLHKPA
|
|---|
| |