| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1387 |
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| Symbol | |
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| ID | 7317879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 1484372 |
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| End bp | 1485778 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643616277 |
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| Product | major facilitator superfamily transport protein |
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| Protein accession | YP_002513459 |
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| Protein GI | 220934560 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0294045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACAC AGCCTGACAG TGTGAACACG ACCACCCTGC TCGCCTACGG CCTGCCTGGA
TTGCCGCTGG CCGTGCTCGG GCTGCCGCTG TACGTGTTCC TGCCTGCTTT CTATGCCCAG
GCGTTTGGCA TCGGTCTGGC CACCGTGGGT GCGGTGCTGC TGGTGGCACG CCTGTTCGAC
GTGATCACCG ATCCGCTGGT GGGCCATCTC AGTGACCACA CCCGATCCCG GTTCGGGCGA
CGCAAGATCT GGATGCTGGC CGGCGCACCG CTGCTGCTCA TCGGCGTGAC ATTCCTGTTC
CTGCCGGCAG GTTCTCCGGG TACGGCCTAC CTGCTGGTGT TCAGTCTCAT CACCTACCTG
GGCTGGACCC TGGTGGCGCT GCCCTACACC GCCTGGGGGG CGGAGTTGTC CCCCGACTAC
CACCAGCGCT CGCGCATCGC CGCGAGCCGC GAGGGCTTCG TGATCGCCGG CACCCTGCTG
GCCGCCGCCG CCCCGGTGCT GCTGGGACAC GGCGAGGACA CTGGCGCGAC GCTGGCCAGT
CTCGCCCTGT GGCTCTGGAT CCTGATCCCC GCGAGCCTGC TGCTGCTCCT GTGGCGGGTG
CGCGAACCCG AGCGCGTGCG TGCGCCCGTG GCCTGGTCCG AGGGCTGGCG CATCCTGCTG
GACAACGCCC CGTTCAAGCG CCTGCTGCTG GCCTACCTGC TGAACGGCAC CGCCAACGCC
CTGCCCGCCA CCCTGTTCCT GCTGTTCGTG GGCCACGTGC TGGGCGCACC GGAGATGGCC
GGCCTGCTGC TGCTCCTCTA CTTTGCCGCC GGGGTGCTGT CCCTGCCCCT GTGGCTGCGC
CTGGCACGGG TGACCTCCAA GCACCGCACC TGGTCCCTGT CCATGCTCTG GGCCTGCGCC
GTGTTCCTGT GGGTGCCGTT CCTGTCCGAG GGGCAGGTGT GGGCCTTCGC CGTGATCTGC
CTGCTGTCGG GCCTGAGCCT GGGCGTGGAC CTGGCCCTAC CCTCGGCCAT CCAGGCGGAC
GTGGTGGATC TGGACACCGC CAACGGTGGC GGCGAGCGCG CCGGGGTGTT CTTCGGCCTC
TGGGGCATGG CCACCAAGCT CGCCCTGGCC CTGGCCGTGG GGATCGCCTT CCCGCTGCTG
CAGCTGGCCG GATTCGACGC CGGCGCCGAG AACAGCGCCT CGGCCCTGAT GTGGCTGGCC
CTGCTCTACG CGGGCCTGCC GGTGCTGCTC AAGCTCGCCG CCACCGCCCT GGTGTGGCGT
TTCCCCATCG ATGCGGGCGC CCACGCGCGT CTGCGCGATC ACCTCGACAC CGCCACGGAG
TCTCACCATG AGCCGATCCC TTCGCCGTCT TCTCCTGCTG CTGTTCCTGT CGGCCCTGTT
CAGCGGGTGC GCCAGCATGA AGCCTGA
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| Protein sequence | MSTQPDSVNT TTLLAYGLPG LPLAVLGLPL YVFLPAFYAQ AFGIGLATVG AVLLVARLFD
VITDPLVGHL SDHTRSRFGR RKIWMLAGAP LLLIGVTFLF LPAGSPGTAY LLVFSLITYL
GWTLVALPYT AWGAELSPDY HQRSRIAASR EGFVIAGTLL AAAAPVLLGH GEDTGATLAS
LALWLWILIP ASLLLLLWRV REPERVRAPV AWSEGWRILL DNAPFKRLLL AYLLNGTANA
LPATLFLLFV GHVLGAPEMA GLLLLLYFAA GVLSLPLWLR LARVTSKHRT WSLSMLWACA
VFLWVPFLSE GQVWAFAVIC LLSGLSLGVD LALPSAIQAD VVDLDTANGG GERAGVFFGL
WGMATKLALA LAVGIAFPLL QLAGFDAGAE NSASALMWLA LLYAGLPVLL KLAATALVWR
FPIDAGAHAR LRDHLDTATE SHHEPIPSPS SPAAVPVGPV QRVRQHEA
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