| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1380 |
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| Symbol | |
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| ID | 7317872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1479015 |
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| End bp | 1480013 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643616270 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_002513452 |
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| Protein GI | 220934553 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.238298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGCA CCGAGGACAT CCGCGAACTG CACCTGCTCA TGGGCATGCT GGAGTCCCTG
GACGTGGGAC TGACCGTGCT GGACCGGCAT TTCAACATCA CCCTCTGGAA CGGCTTCATG
GCCAATCACA GCGGCATCCC GGCGGAAAAG GCCATCGGCA GCAACCTCTT CAATCTGTTC
AGCGATGTCC CGGAGGCCTG GCTCAGGCGC AAGGCGCGTG CGGTGTTCAT GCTCAAGAGC
CGCATCTTCA GCACCTGGGA GCAGCGTCCC TATCTGTTGC GTTTCAGGAA CTACCGACCC
ATCACCGGCG TTGCCGAGTA CATGTACCAG AACGTTACCT TCCTGCCCCT GAGCTCACCG
GATGGTGCCG TGGATCACAT CGGCGTGATC GTCTATGACG TCACCGACAT CGCGACCAAC
AAACTGTCCC TGGAAAAGGC CAATGAGGAA CTGGCGTGCC TGAGCCGGAC CGACAGGCTG
ACGCAGCTCA ACAACCGGGG TTTCTGGGAG GAGTGCCTGG GCGGGGAGTT TGCCCGATGC
AAACGTTACG GCACCGTATC CAGCCTGATC ATGTTCGATA TCGATCATTT CAAGAAGGTC
AATGACACCT ACGGCCACCA GGCCGGTGAC GAGGTGATCC GTACCGTATC CCAGCTGCTG
ACCAAGACCC TGCGCGATAC CGATATCGCC GGGCGTTATG GCGGTGAGGA GTTTGGCGTC
ATACTCACCG ATACCAGCGC GGAGAAGGCA CGCGTGTTCG CCGATCGTCT GCGGAGGCTC
AACGAGGCCG TGACTGTGCG GCATGAAGAC GTTGCCATCC GTTTCACCAT CAGTCTGGGG
ATAGCCCAGT TCGATCCGGC CATGGAGCGC CATTCACAGT GGATCGAGGC GGCGGACAAG
GCCTTGTATC TGTCGAAGCA GGGGGGGCGG AATCGGGTGA CGGTGGCGGG GGAGGGTTTG
GATTTGCGGG TCGAGGAGGG TGGGGGGATT CAGCTTTAG
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| Protein sequence | MNRTEDIREL HLLMGMLESL DVGLTVLDRH FNITLWNGFM ANHSGIPAEK AIGSNLFNLF
SDVPEAWLRR KARAVFMLKS RIFSTWEQRP YLLRFRNYRP ITGVAEYMYQ NVTFLPLSSP
DGAVDHIGVI VYDVTDIATN KLSLEKANEE LACLSRTDRL TQLNNRGFWE ECLGGEFARC
KRYGTVSSLI MFDIDHFKKV NDTYGHQAGD EVIRTVSQLL TKTLRDTDIA GRYGGEEFGV
ILTDTSAEKA RVFADRLRRL NEAVTVRHED VAIRFTISLG IAQFDPAMER HSQWIEAADK
ALYLSKQGGR NRVTVAGEGL DLRVEEGGGI QL
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