Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_1350 |
Symbol | |
ID | 7317842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 1447837 |
End bp | 1448121 |
Gene Length | 285 bp |
Protein Length | 94 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643616240 |
Product | type III secretion protein |
Protein accession | YP_002513422 |
Protein GI | 220934523 |
COG category | [S] Function unknown |
COG ID | [COG2257] Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB |
TIGRFAM ID | [TIGR00789] flhB C-terminus-related protein |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.134414 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAAC GCCGCAAACC ACCCCGCAAG GCCGTGGCCC TGCACTACAG CGGCCGCAAT GCCCCCCGCG TCACCGCCAG CGGCGTCGGC CAGGTGGCCG AACGCATCCT GGAGATTGCC CGAGAACACG ATGTGCCCGT GCACGAGGAT GCCCTGCTCA CTGCGGCACT CTCCCAGGTC CCCCTGGGCG ACGAGATCCC GGAAAACCTC TACGTGGCGG TCGCCGAGGT GCTGGCGTTC GTATATTTCC TGAGCGGGAG AACGCCCTAC AGAAGTGAGA AGTGA
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Protein sequence | MSERRKPPRK AVALHYSGRN APRVTASGVG QVAERILEIA REHDVPVHED ALLTAALSQV PLGDEIPENL YVAVAEVLAF VYFLSGRTPY RSEK
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