Gene Tgr7_1343 details

Gene Information

• Locus tag: Tgr7_1343
• ID: 7317835
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. HL-EbGR7
• Kingdom: Bacteria
• Replicon accession: NC_011901
• Strand: +
• Start bp: 1443269
• End bp: 1444009
• Gene Length: 741 bp
• Protein Length: 246 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643616233
• Product: MotA/TolQ/ExbB proton channel
• Protein accession: YP_002513415
• Protein GI: 220934516
• COG category: [N] Cell motility
• COG ID: [COG1291] Flagellar motor component

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.428194
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACATCC TGAGTCTCAT CGGCGTGTTG CTGGCCCTGG TGGCCATCAT CGGCGGCTCC 
ATCGCCAAGG GCAGCGGTCT CGAGGCCCTG TGGAATGCTG CCGCCTTCGT CATCGTGGTG 
GTGGGCACCA TCGCCGCGGC CCTGATGCAG ACCCGGCTCA AGGTGTTCAT GCACGCGCTC 
AAGATCTTTC CCTGGGTGTT CATGGCGCCG CGCATTGATA CCGAGGCGGC GATCGAGAAG 
CTGGTCAACT GGAGCCAGAT CGCTCGCAAG GAGGGCCTGC TGGGGCTTGA GACCCTGGCC 
GAGCAGGAGC CGGATGCCTT CTCCGCCAAG GGCTTGCAGT TGCTGGTGGA CGGCACCGAA 
CCGGAGGCCA TCCGCAACAT CCTGGAGGTG GATCTCAACA CCCGCGAGCA GTTCGACCTG 
CAGGGTGCCA AGGTCTACGA AAGCATGGGA GTCTATGCGC CCACCCTGGG CATCATCGGC 
GCGGTCATGG GCCTGATGGC GGTCATGCAG AACCTGGCTG ATCCGAGCCG CCTGGGCGCG 
GGTATCGCCG CTGCCTTCGT GGCCACCATC TACGGCATCG CCTCCGCCAA CCTGTTTTTC 
CTGCCCGTGG GCAACAAGCT CAAGAACACG GTGCAGAGCC AGAGCGCGTA CCGGGAGATG 
ATCATCGACG GGATCATCTC CATCGCCGAG GGCGAGAATC CGCGCAACAT CGAAACCAAG 
CTCAGGGGCT ACATGCTCTG A 

 

Protein sequence

MDILSLIGVL LALVAIIGGS IAKGSGLEAL WNAAAFVIVV VGTIAAALMQ TRLKVFMHAL 
KIFPWVFMAP RIDTEAAIEK LVNWSQIARK EGLLGLETLA EQEPDAFSAK GLQLLVDGTE 
PEAIRNILEV DLNTREQFDL QGAKVYESMG VYAPTLGIIG AVMGLMAVMQ NLADPSRLGA 
GIAAAFVATI YGIASANLFF LPVGNKLKNT VQSQSAYREM IIDGIISIAE GENPRNIETK 
LRGYML