| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1338 |
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| Symbol | |
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| ID | 7317830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1437963 |
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| End bp | 1438688 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643616228 |
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| Product | RNA polymerase, sigma 28 subunit, FliA/WhiG |
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| Protein accession | YP_002513410 |
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| Protein GI | 220934511 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.426403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTACTCGA GCGAACTCCT GGACCGCAAC CGCCTGGTGG ATGCGCATGT GCCGCTGGTC
AAGCGCATTG CCTACCACCT GCTGGGTCGG CTGCCTTCCA GCGTGCAGGT GGACGACCTG
ATCCAGGCCG GTGTGGTGGG TCTGCTCGAG GCAGCGCAGC AGTACGACGC GACCCAGGGG
GCCAGTTTCG AGACCTATGC GGGGATCCGC ATCCGCGGCG CCATGCTCGA CGAGGTGCGA
CGCTCCGACT GGACGCCGCG CTCGGTACAT CGCAACGCGC GCCGGGTGAG CGAGGCCATG
CGCCTGGTGG AGAACCGCCT GGGCCGCGAG GCGCAGCCGG CGGAGGTGGC CGCGGAACTG
GGCGTGAGCC TGGACGAGTA CCAGCACATG GTCAGCGATG CCGCCTCCTG CAAGGTGCTG
AGCTTCGAGG ACATCTTCGA GCCGGACTCC GAGGGCGAGG ACCTGCTGCC CGGGGACGAG
CCGAGCCCCT TCGAGGCCCT GCAGTCCGAT GGTTTCAGGG CGGCGCTGGC CCGGGAGGTG
GGCGCGCTGC CGGAGCGTGA GCGGCTGGTG ATGTCGCTCT ATTACGACGA CGAACTCAAC
CTGCGTGAGA TCGGCGAGGT GCTCGGTGTC AGCGAGTCCC GGGTCTGCCA GCTCCACGGC
CAGGCCCTGG TGCGCCTGCG GGCGCGCATG AGCGACTGGA CCGGTCATTC GAGCGAGCAG
AAATGA
|
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| Protein sequence | MYSSELLDRN RLVDAHVPLV KRIAYHLLGR LPSSVQVDDL IQAGVVGLLE AAQQYDATQG
ASFETYAGIR IRGAMLDEVR RSDWTPRSVH RNARRVSEAM RLVENRLGRE AQPAEVAAEL
GVSLDEYQHM VSDAASCKVL SFEDIFEPDS EGEDLLPGDE PSPFEALQSD GFRAALAREV
GALPERERLV MSLYYDDELN LREIGEVLGV SESRVCQLHG QALVRLRARM SDWTGHSSEQ
K
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