| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1326 |
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| Symbol | ispG |
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| ID | 7317818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 1426647 |
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| End bp | 1427876 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643616216 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_002513398 |
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| Protein GI | 220934499 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGA CATCGTCCGT AAAGCGTCAC CGCACCGTTC CCGTCCGGGT GGGCAACGTC
ACCGTGGGTG GCGACGCCCC CGTGATGGTG CAGTCCATGA CCAACACCGA TACCGCCGAC
GCGGTACGCA CCGCCGTGCA GGTGGCGGAG CTGGCCCGGG CCGGTTCGGA GGTCGTACGC
ATCACGGTGA ACACGGAAGA AGCGGCCGCG GCGGTGCCGG AGATCCGCGA GCGCCTGGAC
GCCATGGGCA TCCCGGTGCC CCTGGTGGGG GATTTTCACT TCAACGGCCA CAAGCTGCTG
ACCAGGCACC CTGCCTGCGC CGAGGCCCTG GCGAAACTGC GCATCAACCC GGGCAACGTG
GGGCGTGGCG CCAAGCGCGA CACCCAGTTC GCGCAGATGA TCGAGATCGC CTGCCGCTAC
GACAAGCCGG TGCGTATCGG CGTGAACTGG GGCAGCCTGG ACCAGGCCCT GCTGGCGCGT
CTCCTGGACG AGAACGCCGC CCGGCCCGAG CCCCTGGCAC TGGAGGAGGT CACCCGGGAG
GCCCTGATCA CCTCCGCCCT GGAGAGCGCC GCCCAGGCGG AGGCCATCGG CCTGCCCCAC
GACCGCATCG TGCTGTCCGC CAAGGTCAGC GGCGTGCAGC CCCTGATCCG GGTCTACACC
GAGCTGGCCA GCCGCTGCGA CTATCCTCTG CACCTGGGCC TCACCGAGGC GGGCATGGGC
GTGAAGGGCA TCGTCGCCTC CACCGCGGCC CTGTCCATCC TGCTGCAGCA GGGCATCGGC
GACACCATCC GCATCTCGCT CACCCCCGAG CCCGGCGGCG ACCGCACCCA GGAGGTGATC
GTGGCCCAGG AGATCCTGCA GAGCCTGGGC CTGCGCAGCT TCCTGCCCTC GGTGGTGGCC
TGCCCCGGCT GCGGACGCAC CACCAGCGAG TACTTCCAGC AACTGGCCCA GGACATCCAG
ACCTACATCC GCCACCAGAT GCCCAACTGG CGCAAGACCT ATCCCGGCGT GGAGGAGATG
ACCGTGGCGG TGATGGGCTG CGTGGTGAAC GGCCCAGGCG AGAGCAAGCA CGCCAACATC
GGCATCAGCC TGCCCGGCAC CGGCGAGGTG CCGGTGGCAC CGGTCTACGA GGACGGGGAA
AAGACCGTGA CCCTGAAAGG CGATCACATC GCCGAGGAAT TCCAGGCCCT GGTGGATGCC
TATGTGAAGC GCACGTATGG ACGGGCGTAA
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| Protein sequence | MSQTSSVKRH RTVPVRVGNV TVGGDAPVMV QSMTNTDTAD AVRTAVQVAE LARAGSEVVR
ITVNTEEAAA AVPEIRERLD AMGIPVPLVG DFHFNGHKLL TRHPACAEAL AKLRINPGNV
GRGAKRDTQF AQMIEIACRY DKPVRIGVNW GSLDQALLAR LLDENAARPE PLALEEVTRE
ALITSALESA AQAEAIGLPH DRIVLSAKVS GVQPLIRVYT ELASRCDYPL HLGLTEAGMG
VKGIVASTAA LSILLQQGIG DTIRISLTPE PGGDRTQEVI VAQEILQSLG LRSFLPSVVA
CPGCGRTTSE YFQQLAQDIQ TYIRHQMPNW RKTYPGVEEM TVAVMGCVVN GPGESKHANI
GISLPGTGEV PVAPVYEDGE KTVTLKGDHI AEEFQALVDA YVKRTYGRA
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