| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1310 |
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| Symbol | |
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| ID | 7317801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1407300 |
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| End bp | 1409543 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643616200 |
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| Product | Capsule polysaccharide biosynthesis protein |
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| Protein accession | YP_002513383 |
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| Protein GI | 220934484 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3563] Capsule polysaccharide export protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGTAA AAAATAAATT TAGAAAACTA ATTCTAAACC CTAGAGCTTT CTTGTATGAC
TCGAAGTATC CGCTATTGCG TTGGATAAGT AAGTTCTTGG TGTCATCGCG TAAAGAACAT
TCAATCGTAA GCGCGGTGCG TGAACAGTCG AATATGAGTC GGCCGGTGTC AGCGGCAACA
TCAGGTAATC GGAATTACCC AAAAGTCGAT GTAAGTGATG TGTTTAAGCT TAAGCTTGAT
CTTTGGAGTA CTTACCGTAT ACCTAGTCGG CTGATATCCA ATGCAAATAC TCCTGTTGTT
GCCGTACTAC CTCTAGGTGT TCCTTACATA GATGCCGTGC GCATGAATCG GATCGAAAAT
GAAGGCTGCA CCCCCTTATT GCTGCCACTG TGGGAACACT CTTCGAGTGA CAACGATATT
GATGACCTAG AGCACGTGAC TGACCGTGAG CCCGCGCAAC TCGGGATCAT TGTGCGCGCT
ATGCTGAAAA AGATGCAGGC GGCAGATGCG ACGATTCTCG CACTGCCTGA TGACAGCTCT
AACCTGGCGC GATCTCTGGC AATACGTGCG CGCGCTATGG GTCTGAAAGT AATTGGTGAC
TTTCCGGGTT TCGCGCCTAG CTCCACGTTG ATCCCGGCGG TCGATTGGGA ACTGCGAGTC
GGCAGCCAAA TATCTTCAAC ACAGCTAACT GAAAAGGAGC TTCATCGCGT ACGAATTCTC
ATTGGTGTGG GTGGCAATGA CGCTATCCGT TTACTACTTC TTCCCCCGCG TCAGTTCGGT
ATGCGTGATG ATATGTTGCA AGCTGCGGTC GAGGCGCAAT TAGTCGACAT GCTCGCTGCG
TGTGCTGAAA CTGATCATAT TGTTGTTCTT GCGAAACGTA GAAAGCGAGG ATTCCTCAAT
AGTACGTGTC TGAAACTCTT AAATACAAAG TATCGCAAGT CGATCGTCTT CTATGACGAA
GGTCTAGATG TGATGAATCT GGTTAAAGCG GCGGTTGAGA CACGTGCACC GGTTGGCAGT
TTTCCTCCGG GGTGGGGGGA TGGCGGTAGG GTTAAATATT ACGAATTGGC GAAGACGCCC
GATGATATCG GGTCCATGTT GCCACCATCT CGTCAGGCAA TGCATCTTAG CGATATAGTC
AATGCGCCAA ATATATCGCC GTGGCAAAAT GCGCCGTGCG ATGAACGCGA CGTGGTGCTA
GCGCGTATCA TTAATGGTAT TGGCCTTGAT ATGATCGCTG TGCCAGATCC CCTGACAAAC
CAAGCGATCA CTGAAGGCAG ACAGAGACAC TTGAAGAATC TACTCAATGC GAGAGAGCGC
TGCTATGGCA TAGAGGCTGC GTCAATGTGT GCAGAAGCAT TCATTCAATG GGGTGCGGAA
CCCAATGAGT CAAAGGAGCG ACCGGAGATT CTTCGAAGTC TTATCGCTGC TCCGCGTCTT
TATCTGGAGG ATGGTTTCAT CCGGTCGCTT GGGCTATGGA CGAACCCTAA TGAGCCAACG
TGTTCGGTAG TGATCGACAC GCGTTCCATT TACTATGACG CCTCGCGTCC TTCGCTTCTA
GAAACTATAC TCGCATCGGA TTACGTGATC GATGATGAAG CGGTTAATCG GTCCAGACGG
CTAATTGACT CTATCGTTCA TCACTGCATC TCCAAATATA ACTATTCACA GGTGCTTGAT
CTGGATTTTC GGAGCCCTGG TAAGCGCACG ATTCTGATCG TAGATCAGAA GGCTGGTGAT
ATGTCAATAA AATATGGGGC TGCTAGCGAT GAAAGTTTTC GTTTGATGCT GGACACGGCA
TTAGAACTTA ATGAGGTAGA GATCGTTATC AAACAGCATC CATGCGCCAT CAATGGAGAT
GATAAGCAGG CACACTATAC CGAGGCATTT CTTGGCACTA TCGCGCAGCG AGAAAATGTT
CACCTTATAG GTTTCGATGT GAACCCATAC TCGCTGATCA ATGCAGTAGA TGAGGTGTGG
GTCGTAAGTT CGGGTATGGG ATTTGAAGCA TTGATGGCGG GTAAGCCGGT CCGTTGCTTT
GGTGTGCCTT TCTATGCCGG ATGGGGCTTG ACAGAAGACT GTGTAGACTG CGAGCGGCGA
AGCAGAAATC GAAGTCTGGA GGAAGTATTC CACGTCTTTT ATGTAATGCT TACACGCTAC
GTGCATCCTG ACACTGGTGA GCCTGCAGAG ATTGAAACGA TCATTAACTA CTTTGCGGAA
CAGATTGCGG CGCGTCAGAG ATGA
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| Protein sequence | MPVKNKFRKL ILNPRAFLYD SKYPLLRWIS KFLVSSRKEH SIVSAVREQS NMSRPVSAAT
SGNRNYPKVD VSDVFKLKLD LWSTYRIPSR LISNANTPVV AVLPLGVPYI DAVRMNRIEN
EGCTPLLLPL WEHSSSDNDI DDLEHVTDRE PAQLGIIVRA MLKKMQAADA TILALPDDSS
NLARSLAIRA RAMGLKVIGD FPGFAPSSTL IPAVDWELRV GSQISSTQLT EKELHRVRIL
IGVGGNDAIR LLLLPPRQFG MRDDMLQAAV EAQLVDMLAA CAETDHIVVL AKRRKRGFLN
STCLKLLNTK YRKSIVFYDE GLDVMNLVKA AVETRAPVGS FPPGWGDGGR VKYYELAKTP
DDIGSMLPPS RQAMHLSDIV NAPNISPWQN APCDERDVVL ARIINGIGLD MIAVPDPLTN
QAITEGRQRH LKNLLNARER CYGIEAASMC AEAFIQWGAE PNESKERPEI LRSLIAAPRL
YLEDGFIRSL GLWTNPNEPT CSVVIDTRSI YYDASRPSLL ETILASDYVI DDEAVNRSRR
LIDSIVHHCI SKYNYSQVLD LDFRSPGKRT ILIVDQKAGD MSIKYGAASD ESFRLMLDTA
LELNEVEIVI KQHPCAINGD DKQAHYTEAF LGTIAQRENV HLIGFDVNPY SLINAVDEVW
VVSSGMGFEA LMAGKPVRCF GVPFYAGWGL TEDCVDCERR SRNRSLEEVF HVFYVMLTRY
VHPDTGEPAE IETIINYFAE QIAARQR
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