| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1308 |
|---|
| Symbol | |
|---|
| ID | 7317799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 1405633 |
|---|
| End bp | 1406595 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643616198 |
|---|
| Product | ISRSO18-transposase protein |
|---|
| Protein accession | YP_002513381 |
|---|
| Protein GI | 220934482 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3039] Transposase and inactivated derivatives, IS5 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGT TGGGCTTGAG CGATTCGGGC TTTGTGAAGC ATCCCAAGAA GACCCGCAAG
GCAGAGTTTC TGGCCGAGAT GAACCAGGTG GTGCCCTGGT CCCGGCTGGA GGCCTTGATC
GAGCCCTACT ATCCCAAGCC CGGCAATGGG CGCCGCCCGT TCGGGCTTGA GACGATGCTG
CGCATCCACT TCATGCAGCA GTGGTTCGCC TATTCCGACC CGGCCGTGGA AGAGGCGCTG
CACGATATCC CGCTGCTGCG CGAGTTCGCG GGCCTGGATG CCACGGTGGA GGCCATTCCT
GACGAGACCA CCATTTGTAA GTTCCGTCAC CTGCTCGAAC GCCATGGCCT GGCAGGCGCG
CTGCTCGAAG AGATCAATGG TCTTTTGGGC GAGCGCGGCC TGATCCTGCG CAAGGGCACG
ATGGTCGATG CCACCCTGAT TGCTGCGCCG ACCTCCACGA AGAACGCAGA CGGCAAGCGC
GATCCGGAGA TGAGTTCGAC GAAGAAGGGC AACCAGTGGT ACTTCGGCAT GAAGGCCCAT
GTGGGTGTGG ATACTGCCCA TGGCCTGGTG CACACCGTGG TGGGCACGGC GGCGAAGGTG
CCGGATGTGA AGCTCACCGA TACCCTGCTG CACGGTGATG AGCAAGAAGT ACATGGGGAC
AAGGGCTACA CGACTCGGGA GCGCAACCTG GCGGCGAGTG ATCCGGCCAG CGGTCCGCTG
TGGTGTTTCC CGTTCAAGCG TGTGCGGGGC CGGGAACTGC CCGAGTGGAA GCGCGAGATC
AACCATCGCA TGTCCCAGCT TCGAGCACGG GTGGAGCACC CGTTTCGGGT GATCAAGCGC
CAGTTTGGAT ATACCAAGGT GCGCTACCGG GGGCTGGCCA AGAACACGGC CCAGCTCACG
ACCCTGTTTG CCTTGTCGAA TCTGTACCTG GCGAGGCGCC AGTTGTTGCG TATGGCAGGA
TAG
|
|---|
| Protein sequence | MKQLGLSDSG FVKHPKKTRK AEFLAEMNQV VPWSRLEALI EPYYPKPGNG RRPFGLETML
RIHFMQQWFA YSDPAVEEAL HDIPLLREFA GLDATVEAIP DETTICKFRH LLERHGLAGA
LLEEINGLLG ERGLILRKGT MVDATLIAAP TSTKNADGKR DPEMSSTKKG NQWYFGMKAH
VGVDTAHGLV HTVVGTAAKV PDVKLTDTLL HGDEQEVHGD KGYTTRERNL AASDPASGPL
WCFPFKRVRG RELPEWKREI NHRMSQLRAR VEHPFRVIKR QFGYTKVRYR GLAKNTAQLT
TLFALSNLYL ARRQLLRMAG
|
|---|
| |