| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1276 |
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| Symbol | |
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| ID | 7317765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1368575 |
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| End bp | 1370848 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643616164 |
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| Product | (NiFe) hydrogenase maturation protein HypF |
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| Protein accession | YP_002513349 |
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| Protein GI | 220934450 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.853267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGCCTG AGACCCGCCG CCTGCGCATC GGCGGGCAGG TGCAGGGGGT GGGTTTTCGT
CCCTTCGTCT ACCGCCAGGC CCTGAGCCTC GGCATTCGCG GCTGGGTGCA GAACCGCACC
GGCGAGGTGC TCATTGAGGC GAGCGGCGAG CCGGATCTTC TAAAGACCTT TCTTCACCGC
CTGTTGTACG AGGCGCCGCC GCTGGCACGT CCACGGCTCA TGGAACAGCA GCAACTCTCC
CAGGCATCCG CGAGCGATTT CCGCATCCTT CCCAGCGATG CCGGGGCACC GCCCCGCGTC
CATGTGCCGC CCGATTTCTT CACCTGCGAT GCCTGTCTGG GCGAACTCGC CGATCCCGCT
GCGCGCCGGC ATCGCTATCC GTTCATCAAC TGCACCCAGT GCGGACCCCG CTACACCCTG
ATCCGGGCAC TGCCCTACGA CCGGGCCAAC ACCGCCATGG CCGGTTTCCA CCTGTGCGAG
GCCTGTGGCG CCGAGTACCG GTCGCCCGCG GACCGGCGCT TCCACGCCGA GCCCCTGGCC
TGTCCGGTCT GTGGGCCGAC GCTGACGTAC AAGGGTCCCG AAGGGGCGGC CTCGGGCAAC
GAGGCGGCCC TGGCCGCCTG CGTCGCCGCC CTGAAGGCGG GACGCATCGT GGCGGTCAAG
GGCGTGGGCG GTTACCACCT GCTGTGTGAT GCCACCGATC CTGCCGTGGT CGCGCGCCTG
CGTGAACGCA AGCACCGGCC CCACAAACCG CTGGCCGTGC TGTTTCCCTG GGAGGGCGAT
GACGGTCTCG CGTCGCTGCG CCGGCATGCC CATCCAGGCG ATGCCGAGGC GGCCCTGCTG
ACAGGGCCCG AACGGCCCAT CGTCCTGGTG ACGCTGAAGG CGGACCTTGG TCTGGCCAAG
GGCATCGCGC CCGGGCTGTC CGAAGTCGGC GCCATGCTCC CCTACAGTCC CCTGCATCAC
CTGCTCAGCC GGGACTTTGG CGCGCCACTG GTGGCCACCT CCGCGAACCG TTCCGGTGAG
CCGGTGTTCA TCGCGGCCGC CGAGGTGGAG GCGGCGCTCG GTTCGGTGGC CGATGCCTTC
CTGCACCACG ATCGTGACAT CCTTCGGCCT GCCGATGACA GCGTCATGAG GGTGATTGGA
GGACGCGGGC GGCGCCTGCG CATCGGGCGC GGGCTGGCGC CGCTGGAGTT GGACTTGCCA
CGTCGAGTCG AGCGGCCGAC GCTCGCCGTG GGCGGGCACA TGAAAAACAC CATCGCGCTC
GCCTGGGAGG AGCGGGTGGT GATCTCGCCC CATATCGGCG AACTGGACAG CCCGCGCAGC
CTCGCGGTGT TCGAACAGGT GATCGGGGAT CTCGGTGCGC TCTACCGGGT GACGCCCGAG
CGGGTGTTGC ACGATGCCCA CCCCGGCTAT GGCTCCACCC GCTGGGCGAA GGCTCACGCG
CAACGTCACG GGCTCCAACG GCGGCCGGTG TTTCACCACC ACGCCCACGC GGCGATGCTC
GCCGGCGAAC ACCCGCAGGT GGACCGTTGG CTGGTGTTCA CCTGGGACGG CACAGGCTTC
GGCGAGGACG GCACGATCTG GGGCGGTGAG GCGCTGCTGG GTGTGCCCGG GCACTGGCGA
AGGGTGGCGA GCCTGCGACC CTTCCGGTTG TCCGGGGGCG AGAAGGCTGG CCGTGAACCC
TGGCGATCGG CGGCCGCACT GGCCTGGGAG ACGGGCCGGG ACTGGCAACC GGAGGGGCTC
GACGTCTCCC TGGCACGTCA GGCCTGGGAA CGGCAACTGA ACACCCCGGT CTGCACGGCC
ATGGGCAGGG TATTCGATGC CTGCGCGGCG CTTGCAGGCG TGATGCAGCA GACCAGCTAC
GAGGCCCAGG CGCCCATGGT CTGGGAGTCC CTGTGTCGTG AGGCGGACGC ATCAATCGAG
GTGCCGAGCC TGCCGCTTGA GCAGGACGCC ATGGGCGTGC TGCGCATGGA CTGGTCGCCG
CTGGTGGCGC TCATGCTCGA CGGGCAGCGT TCGATCGTCG AACGCAGTTG TCTGATGCAT
GAGGCGCTGG CCGAGGGCCT GGCGACGCAG GCGATGCGAC TGCGAGAGAT CCATGGCGAG
TTCACGGTGG GCCTGAGTGG TGGCGTGTTT CTCAACCGGC CACTGGTGGA GCGCGTCATG
CAGCGGCTCG CGTCACGGGG CTTTGCCGTG CACCTGCCCG AACAGATCCC CTACAATGAC
GCGGGCCTGA GTGTCGGCCA GATCATCGAG ACTCTTTTCT CCACACCCGC TTGA
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| Protein sequence | MSPETRRLRI GGQVQGVGFR PFVYRQALSL GIRGWVQNRT GEVLIEASGE PDLLKTFLHR
LLYEAPPLAR PRLMEQQQLS QASASDFRIL PSDAGAPPRV HVPPDFFTCD ACLGELADPA
ARRHRYPFIN CTQCGPRYTL IRALPYDRAN TAMAGFHLCE ACGAEYRSPA DRRFHAEPLA
CPVCGPTLTY KGPEGAASGN EAALAACVAA LKAGRIVAVK GVGGYHLLCD ATDPAVVARL
RERKHRPHKP LAVLFPWEGD DGLASLRRHA HPGDAEAALL TGPERPIVLV TLKADLGLAK
GIAPGLSEVG AMLPYSPLHH LLSRDFGAPL VATSANRSGE PVFIAAAEVE AALGSVADAF
LHHDRDILRP ADDSVMRVIG GRGRRLRIGR GLAPLELDLP RRVERPTLAV GGHMKNTIAL
AWEERVVISP HIGELDSPRS LAVFEQVIGD LGALYRVTPE RVLHDAHPGY GSTRWAKAHA
QRHGLQRRPV FHHHAHAAML AGEHPQVDRW LVFTWDGTGF GEDGTIWGGE ALLGVPGHWR
RVASLRPFRL SGGEKAGREP WRSAAALAWE TGRDWQPEGL DVSLARQAWE RQLNTPVCTA
MGRVFDACAA LAGVMQQTSY EAQAPMVWES LCREADASIE VPSLPLEQDA MGVLRMDWSP
LVALMLDGQR SIVERSCLMH EALAEGLATQ AMRLREIHGE FTVGLSGGVF LNRPLVERVM
QRLASRGFAV HLPEQIPYND AGLSVGQIIE TLFSTPA
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