| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1264 |
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| Symbol | |
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| ID | 7317753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 1358008 |
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| End bp | 1359108 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643616152 |
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| Product | transcription factor jumonji, JmjC |
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| Protein accession | YP_002513337 |
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| Protein GI | 220934438 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGATCA GGACTGGCGT ACTGGCCGCG GCCACGATTG CCTTGGTGTT GACCGGGTGC
GGCAAGACCG ACAGGGAGAC CGTTCACGTC TACAACTGGT CGGACTACAT CTCCGACGAG
GTGGTCAAGC GCTTCGAACA GCAGACCGGC ATCCGGGTGG TCTACGACGT CTACGACGCC
AACGAGATCC TGGAAGCCAA GCTGCTGGCC GGACGCAGCG GCTATGACGT GATCTTTCCC
AGCGCCCACC CCTTCGCGGA GCGCCACATC CAGGCGGGTC TGTACCTGCC CCTCGACCCC
GAGCTGCTGC CCAACCGCGT CAACCTGGAG CCCAGCCTGA TGCGCAAGCT GGAGGCCGTG
GACCCGGGCA ACCGCTTCAC CGTGCCCTAC ATGTGGGGCA CCACGGGCAT CGGCTACAAC
GTGGCCCAGG TCGCCGCCAT CCTGGGCGAG GAGGCGGAAG TGGATTCCTG GTCCCTGATC
TTCGATCCGG AGATCGCCGG GAAACTCTCC GCCTGCGGCA TCGCGGTGCT GGACGACGAG
GGCGAGGCCC TGGCCGCCGC CCTGCTCTAC CTGGGCAAGG ATCCCAACAC CACGGACCCG
GCGGACATCG AGGAGGCCGC CAACCTGTTC ATGCAGGTGC GCCCTTTCAT CCGCTACTTT
CACGCCTCCA GGTACATCAA TGATCTCGCC AACGGCGACA TCTGCGTGGC CCACGGCTAT
TCCGGCGACG TGATCCAGGC CCGTGACCGG GCCGAGGAAG TGGGACGCGG CGTGGAGATC
GACTACATCA TCCCCAGGGA GGGCGCGGTG CTCTGGTTCG ATCTCATGGC CATCCCCGCC
GATGCGCCCA ACCCGGGCAA CGCCCACGCC TTCATCAACT TCCTGATGCA GCCGGAGAAC
ATCGCCGAGA TCACCAACGA GGTGGCCTAT GCCAACGCCA ACCGCGCGGC CACGGACCTG
GTGGACGAGG AGATCCGCAA CGACCCCGGC GTGTACCCCA CGGACGAGAT CCGCGAGCGA
CTGGTGACCC AGCAGTCCCT GCCCGACGAG GTCCAACGGC ACCGGGTCCG AATCTGGACC
CAGATCAAGA CCGGGCGGTA A
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| Protein sequence | MGIRTGVLAA ATIALVLTGC GKTDRETVHV YNWSDYISDE VVKRFEQQTG IRVVYDVYDA
NEILEAKLLA GRSGYDVIFP SAHPFAERHI QAGLYLPLDP ELLPNRVNLE PSLMRKLEAV
DPGNRFTVPY MWGTTGIGYN VAQVAAILGE EAEVDSWSLI FDPEIAGKLS ACGIAVLDDE
GEALAAALLY LGKDPNTTDP ADIEEAANLF MQVRPFIRYF HASRYINDLA NGDICVAHGY
SGDVIQARDR AEEVGRGVEI DYIIPREGAV LWFDLMAIPA DAPNPGNAHA FINFLMQPEN
IAEITNEVAY ANANRAATDL VDEEIRNDPG VYPTDEIRER LVTQQSLPDE VQRHRVRIWT
QIKTGR
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