| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1251 |
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| Symbol | |
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| ID | 7317740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1344362 |
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| End bp | 1345141 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643616139 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_002513324 |
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| Protein GI | 220934425 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.124214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGCA TTGCCCTCGG TGTGGAATAC GACGGTTCCG GGTTCTGCGG CTGGCAGACC
CAGTTGCAGG GGCGTGCCGT GCAGGCCTGC GTCGAACAGG CCCTGTCCCG GGTGGCAAAT
CATCCGGTGA GTGTGGTGTG CGCCGGGCGT ACCGATGCGG GCGTCCATGC CACGGCACAG
GTGATCCACT TCGACACCGA GTCCGTGCGC ACGGCCCGCT CCTGGGTGCT GGGCGGCAAC
ACCCATCTGC CGCCGGAGAT CAGCCTGCTC TGGGCAAAAG AGGTCGATGC GGACTTCAGC
GCGCGCTTCT CGGCGCGCAG CCGCCGATAC CGTTACGTGA TCCTCAATCG CTGGGTGCGC
CCCGGTGTGC TGCATCGCAA GGTGAGCTGG CATCATCCCC CCCTGGATGC CGAGCGCATG
CACGCGGCCG GGCAGCGCCT GCTGGGGGAA TGGGATTTCA CCAGCTTCCG CGCGGTAGGC
TGCCAGGCCA AGAGCCCGGT GCGCACCCTC TTGTCCCTGT CGGTCACCCG CCGTGGCGAT
TTCATCTACC TGGACGTGCA CGCCAACGCC TTTCTGCATC ACATGGTGCG CAACATCGCC
GGTGTGCTGA TGGCCGTGGG GGAGGGGGAG CGGCCGGTGG AATGGGTCTC GGAGGTGCTG
CACGCCCGGG ACCGCACCCT GGGCGGTGTG ACGGCGCCAC CCCATGGGCT GTACCTGGTG
CATGTGGAGT ATGAACCGCA GAGTGGGATT GTGTTGGAAC CGTTGTTGCC GGAGTTCTGA
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| Protein sequence | MMRIALGVEY DGSGFCGWQT QLQGRAVQAC VEQALSRVAN HPVSVVCAGR TDAGVHATAQ
VIHFDTESVR TARSWVLGGN THLPPEISLL WAKEVDADFS ARFSARSRRY RYVILNRWVR
PGVLHRKVSW HHPPLDAERM HAAGQRLLGE WDFTSFRAVG CQAKSPVRTL LSLSVTRRGD
FIYLDVHANA FLHHMVRNIA GVLMAVGEGE RPVEWVSEVL HARDRTLGGV TAPPHGLYLV
HVEYEPQSGI VLEPLLPEF
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