Gene Tgr7_1248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1248 
Symbol 
ID7317737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp1339647 
End bp1340669 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content64% 
IMG OID643616136 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_002513321 
Protein GI220934422 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.207297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAGA AGTTCGATGT AGCGGTGGTG GGTGCCACGG GGGCCGTGGG CGAGACCATG 
TTGTCCATCC TGGCCGAGCG CGATCTGCCC CTGGGCGAGG TCTATGCGGT GGCCAGCGAG 
CGTTCCGCCG GCAGCCGGGT GAAGTTCGGT GACCGGTACC TTGTGGTGCA GGATCTCGCC 
AAGTTCGACT TCTCCAAGGT GCAGATCGGC CTGTTCTCCC CGGGCGCGTC CGTCTCCAAG 
GAGTACGCCC CCAAGGCGGC CGCCGCCGGC TGCGTGGTGA TCGACAACAC GTCCCAGTTC 
CGCTACGACG CGGACATCCC GCTGGTCGTG CCCGAGGTCA ATCCCCACGC GGTGGCCGGC 
TACACCAACC GGGGCATCAT CGCCAATCCC AACTGCTCCA CCATCCAGAT GCTGGTGGCG 
CTCAAGCCGA TCCATGACGC CGTGGGCATC GAGCGCATCA ACGTGGCCAC CTACCAGGCG 
GTCTCCGGCA CCGGCAAGGA GGCCATCGAG GAACTGGCGG GCCAGACCGC CAACCTGCTC 
AATGCCAAGC CGGTGGAGAG CAAGGTGTAC CCGAAGCAGA TCGCCTTCAA CGTCCTGCCC 
CACATCGACG TCTTCATGGA CAACGGCTAC ACCAAGGAAG AGATGAAGAT GGTCTGGGAG 
ACCCGCAAGA TCATGGGCGA CGACAGCATC CAGGTGAATC CCACCGCGGT GCGTGTGCCG 
GTGTTCTTCG GTCATTCCGA GGCCGTGCAC ATCGAGACCC GTGAAAAGAT CACCGCCGAG 
GCGGCCCGGG AACTGCTCAG CAAGGCTCCG GGGGTGGTGG TGATTGACGA GCGCAGGGAC 
GGTGGCTATC CCACGGCGGT GACCGAGGCG GCCAACCACG ACCCGGTCTA CGTGGGGCGA 
ATCCGCGAGG ATATCTCGCA CCCCCGCGGA CTGGATCTGT GGGTGGTCTC GGACAACGTC 
CGCAAGGGGG CGGCGCTCAA CAGTATCCAG ATCGCGGAAA TTTTGATAAA AGACTATCTG 
TAG
 
Protein sequence
MSKKFDVAVV GATGAVGETM LSILAERDLP LGEVYAVASE RSAGSRVKFG DRYLVVQDLA 
KFDFSKVQIG LFSPGASVSK EYAPKAAAAG CVVIDNTSQF RYDADIPLVV PEVNPHAVAG 
YTNRGIIANP NCSTIQMLVA LKPIHDAVGI ERINVATYQA VSGTGKEAIE ELAGQTANLL 
NAKPVESKVY PKQIAFNVLP HIDVFMDNGY TKEEMKMVWE TRKIMGDDSI QVNPTAVRVP 
VFFGHSEAVH IETREKITAE AARELLSKAP GVVVIDERRD GGYPTAVTEA ANHDPVYVGR 
IREDISHPRG LDLWVVSDNV RKGAALNSIQ IAEILIKDYL