Gene Tgr7_1246 details

Gene Information

• Locus tag: Tgr7_1246
• ID: 7317735
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. HL-EbGR7
• Kingdom: Bacteria
• Replicon accession: NC_011901
• Strand: +
• Start bp: 1337456
• End bp: 1338094
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643616134
• Product: 3-isopropylmalate dehydratase, small subunit
• Protein accession: YP_002513319
• Protein GI: 220934420
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCCTT TGACCACCGT CGACGGGCTG GTCCTGCCCC TGGACCGCTC CAACGTGGAC 
ACCGACGCCA TCATCCCCAA GCAGTACCTG AAGTCGGTCA AGCGCACCGG TTTCGGCCCG 
AACCTGTTCG ATGACTGGCG CTACCTGGAG CCGGGCGAGC CGGGCATGGA TCACAGCGCA 
CGCAAGCCCA ACCCGGACTT CGTGCTCAAC GCCCCCCGCT ACCAGGGCGC CGAGATCCTG 
CTGGCGCGCA AGAACTTCGG TTGCGGCTCT TCCCGCGAGC ACGCCGTCTG GGCGCTCACC 
GACTACGGCA TCCGGGTGGT GATCGCGCCG AGCTTCGCCG ACATCTTCTT CGGCAACAGC 
TTCAAGAACG GCCTGCTGCC CATCGTCCTG GACGAGGCCG TCGTGGACCG CCTGTTCCAG 
GAGGTGGAAG CCACCGAGGG CTATCGCCTC AAGGTGGATC TGGCCGAGCA GACCGTGACC 
ACCCCCTCGG GCGAGGCGTT CCCCTTCGAG GTGGGCGAGT TCCACAAGTA CTGCCTGCTG 
AACGGCCTGG ACGACATCGG CCTGACGCTT CAGCATGCCG ACGAGATCCG CGCCTACGAA 
CAACGCCGCC GCGCCGAGGC GCCCTGGCTG TTTCGTTGA 

 

Protein sequence

MKPLTTVDGL VLPLDRSNVD TDAIIPKQYL KSVKRTGFGP NLFDDWRYLE PGEPGMDHSA 
RKPNPDFVLN APRYQGAEIL LARKNFGCGS SREHAVWALT DYGIRVVIAP SFADIFFGNS 
FKNGLLPIVL DEAVVDRLFQ EVEATEGYRL KVDLAEQTVT TPSGEAFPFE VGEFHKYCLL 
NGLDDIGLTL QHADEIRAYE QRRRAEAPWL FR