| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1234 |
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| Symbol | psd |
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| ID | 7315486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 1325110 |
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| End bp | 1325979 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643616122 |
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| Product | phosphatidylserine decarboxylase |
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| Protein accession | YP_002513307 |
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| Protein GI | 220934408 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase |
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| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.70474 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGG TGCCGCCCCG CTGGCTTGAC TGGCTCAAGT CCCTGCCCCT GTACCTGCTG
CCCCACCACG CCATCTCCCG ACTGGTGCAT CGCCTCGCCC GCTGGGAGAC CCGGGCCAAG
AACCCGGTGC TGCGCTGGTT CATCCGCCAT TACGGGGTGG CCATGGGCGA GGCCCAGGAA
TCCCGCCCCG AGGCCTACGC GAGCTTCAAC GCCTTCTTCA CCCGGGCCCT GCGACCCGAG
GTCCGCCCCC TGGACCCGGA CCCGCTGGCC CTGCTGAGCC CTGCCGACAG CACCGTCAGC
GCCCTGGGAC GCATCCGCGA CGGGCGCATC ATCCAGGCCA AGGGCCATGG ATACAGCCTG
GACATCCTGG TGGGCGGTGA CCCCCGGCGG GCGGATCCCT TCCGCAACGG ACATTTCATC
ACCCTCTACC TCTCCCCCCG GGACTACCAC CGGGTGCACA TGCCCGCCGC CGGGCGCCTG
CTGGAGACGG TGTACGTGCC CGGCCGGCTG TTCTCCGTGG CGCCCCACAC GGTGCGCACC
ATCCCCAACC TGTTCGCCCG CAACGAGCGG GTCGCCTGCC TGTTCGACAC CGACCGAGGC
CCGCTCGCCT CCATCATGGT GGGCGCCATC AACGTGGGCA GCATCGAGCT GGTGTGGGCC
GGCGAGATCA CCCCGCCGCA GCATGACCTG ACCGTCACCC GCTACGACCA CCGCCCGGTG
CAGCTGGCCC GGGGCGCCGA GATGGGGCGC TTCAACCTGG GTTCCACGGT GATCCTGCTG
CTGCCGGAGG GCCCCTTCAC CTGGAACGCC GAGCTGGCGC CGGGGGTGCG GGTGAAGATG
GGGCAGGCAC TGGGGAAGTG GGAAGGGTGA
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| Protein sequence | MSQVPPRWLD WLKSLPLYLL PHHAISRLVH RLARWETRAK NPVLRWFIRH YGVAMGEAQE
SRPEAYASFN AFFTRALRPE VRPLDPDPLA LLSPADSTVS ALGRIRDGRI IQAKGHGYSL
DILVGGDPRR ADPFRNGHFI TLYLSPRDYH RVHMPAAGRL LETVYVPGRL FSVAPHTVRT
IPNLFARNER VACLFDTDRG PLASIMVGAI NVGSIELVWA GEITPPQHDL TVTRYDHRPV
QLARGAEMGR FNLGSTVILL LPEGPFTWNA ELAPGVRVKM GQALGKWEG
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