| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1228 |
|---|
| Symbol | |
|---|
| ID | 7315480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 1317536 |
|---|
| End bp | 1318210 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643616116 |
|---|
| Product | putative L-fuculose phosphate aldolase |
|---|
| Protein accession | YP_002513301 |
|---|
| Protein GI | 220934402 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
|---|
| TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.642951 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGAAT CCCTGGCAGC CAGCGACGAG ACCCGGGCCC GGGACGCACT CACCCGGGCC
GGACTCGCCC TGTACCGGGC GGGACTCAAC CAGGAAGCGG AAGGCAATCT CAGCCTGCGC
CTGGGCGAGG GTCTGCTCAT CACCCCGTCC GGCCTTCCCT GGGAACGGCT CACGCCGCAG
CGCCTGGTCC TACTGGATCG CGACAACCAC GCCCGGGGCG GGCGCCCTTC CAGCGAATGG
CCCCTGCACC GGGCGATCCT CGATGCGCGC CCCGAGGTCC ATGCCGTGGT GCACACCCAT
TCCATGTTTG CCACCACCCT CGCCTGCCTG CGCCGGGACC TGCCGCCCTT CCACTACATG
ATCGCCCAGG CCGGCGGCCC GGACATCCGC TGCAGCCGCT ACGCCACCTT CGGCAGCCAA
GACCTGGCCG AGGCCGCCGT AGATGCACTG CAGGACCGCA AGGCGTGCCT GCTGGCCAGC
CACGGCATGG TCACGGTGGG GAAAACCCTG GAGGAGGCGG TGAGCCTCGC ACTCACCGTA
GAGAAGCTCT GCGAACAGTA CTGGCGCGCC TGCCAGCTGG GGGAACCGGT GCTGCTGAGC
GATGCGGAGA TGGACGAGGT GATGGCGCAA TTCTCCGACT ACGGCCCACA GTACGATGAA
AAAGACCTAA CGTAG
|
|---|
| Protein sequence | MSESLAASDE TRARDALTRA GLALYRAGLN QEAEGNLSLR LGEGLLITPS GLPWERLTPQ
RLVLLDRDNH ARGGRPSSEW PLHRAILDAR PEVHAVVHTH SMFATTLACL RRDLPPFHYM
IAQAGGPDIR CSRYATFGSQ DLAEAAVDAL QDRKACLLAS HGMVTVGKTL EEAVSLALTV
EKLCEQYWRA CQLGEPVLLS DAEMDEVMAQ FSDYGPQYDE KDLT
|
|---|
| |