Gene Tgr7_1226 details

Gene Information

• Locus tag: Tgr7_1226
• ID: 7315478
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. HL-EbGR7
• Kingdom: Bacteria
• Replicon accession: NC_011901
• Strand: +
• Start bp: 1314313
• End bp: 1316226
• Gene Length: 1914 bp
• Protein Length: 637 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643616114
• Product: flagellar hook-associated protein FlgK
• Protein accession: YP_002513299
• Protein GI: 220934400
• COG category: [N] Cell motility
• COG ID: [COG1256] Flagellar hook-associated protein
• TIGRFAM ID: [TIGR02492] flagellar hook-associated protein FlgK

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.548532
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCCGGG GTGCCGTCAT GAGTAGCGGC GTCCTGGGTA TCGGCGTGTC CGGCCTGCTG 
GCCTTCCAGC GGGCGCTCGG TGTCACCGGC AACAACATCG CCAACTCCGC CACCGAGGGT 
TACAGCCGCC AGCGCATCGA TCTCAGCACC CAGATCCCGC AGTTCGCCGG CAATGGCTAC 
TTTGGCAGCG GCGTACAGGT GTCGGGAGTG AATCGAATCT TCGACCAGTT CGTGGAGACC 
CAGCTGCGCA ACAGCACCTC CGCGAGCGAG CAGTATGCCC TCTATTACGA TTTTGCCCGC 
CGGGTGGACA ATCTGTTGGC AGATCCCGAC TCGGGTCTGG CACCGGGTCT TCAGCAGTTC 
TTTGCCGCCG TGCAGGACGT GGCCAACGAC CCGACCTCCA ATGCTGCCCG GCAGGTGCTG 
ATCTCCGAGG CGGAATCCCT GGTGGATCGC TTCAGCTTCC TCAATCAGCG CCTGGAGGAG 
CAGCGCAATC TGGTCAATGG CCAGATCCAG ACCACGGTGG CGGAGATCAA CAGCCTGGCT 
GAAGCCATTG CCGATCTGAA CGAGGACATC GTCTCCGCCC TGGGCCGGGG TGGCGGGGCG 
CCGCCCAACG ACCTCCTGGA CCAGCGTGAC CGGCTGGTGC TGCAACTCTC CGAGCTGGTG 
TCCGTGAACA CCATCGAGCA GGACGACGGC GCCCTCAATG TCTTCATCGG CAATGGCCAG 
AACCTGGTGC TGGGCAACCG GCCCACGGTG CTGGTCGCCG ATGGCCTGGG TCCGGACCCG 
GCCCAGATGC AGGTCGGCTA TGTGAGCCCC GGCGCCACGG TGGACATCAC CTCCTACATG 
ACCGGTGGCC GGCTCGGTGC ACTGCTGGAC CTGCGCACCT CGGTCCTGGA CGTGGCGCAG 
AACTCCCTGG GACGCACCGC CATCGGCCTG GCCCAGGCTT TCAATGATCA ACATGTCCTG 
GGGCAGGATC TCAACGGTCA GCTCGGCGAG GCCTTCTTCC GTGTCCCCGC GCCAGAGGCC 
ATCGCCGGCG CGAGCAATGC CGCCACCGGT GATCTCCAGG TGGAGATCCA GGACTACTCG 
GCGCTCACAC TGAGCGACTA TCGCCTGCGT TTCGACGGCG CGGACTGGCA GCTGCGCCGG 
GAGCCGGGTG GTCAGCTGCT GGGTGCGGTC GCACCCGGTG GCACGCTGCT GATCGAGGGG 
CTCAGTATCG ACACCTCGGG CATCGCGGGT GCTGCCACCG GTGACACCTT CCTCATTCGG 
CCCACCCGAG GTGGTGCCAA CCAGATCGAT ACCGTGATCA GCGACCCGCG CATGGTCGCC 
GCGGCCTCGC CCGTGCGTGC CAGCCCGGAC GGGGACAACA CGGGGCCTGC GATCGTGCGC 
TCGGTGATTG CCGTGGATCG TGACGCCCTG GATCTCACGC CGGTCACGGT GACCTACAAT 
GCCGGTGCCT CCCAGTTCGA GATCGGCGGG GACACCTATC CCCTGGACCC GTCCGGTGTG 
ACCGTCATCA ACCACAACGG CTGGGAGCTC ACCATCGAAG GGGTGCCCGA TGACGGTGAC 
GCATTCCAGG TGGGTCCGAA CATCGGCGGG GTAGGCGACA ACCGCAACGC CCTGGCACTG 
GCCGGGCTTC AGGACCAACG CATGATGGTC GGCGGTACCG CCACCCTCGA AGGCACCTAC 
AACACCCTGG TGGCGGAGGT GGGCACCCGC ACCCGACAGG CCGAGATTGC CGCCCGCGCC 
CAGGTCAAGC TGCTGGACGA GGCCAGGGCC CAGCGGGAGT CCATCTCCGG GGTGAACCTG 
GACGAGGAGG CGGCCAACCT GCTGCGCTAT CAGCAGGCCT ACCAGGCGGC CGCACAGGTC 
ATCTCGGTGA CCAACTCCCT GTTCGACACC CTGATCAATG CCGTGAGGCG TTAG 

 

Protein sequence

MFRGAVMSSG VLGIGVSGLL AFQRALGVTG NNIANSATEG YSRQRIDLST QIPQFAGNGY 
FGSGVQVSGV NRIFDQFVET QLRNSTSASE QYALYYDFAR RVDNLLADPD SGLAPGLQQF 
FAAVQDVAND PTSNAARQVL ISEAESLVDR FSFLNQRLEE QRNLVNGQIQ TTVAEINSLA 
EAIADLNEDI VSALGRGGGA PPNDLLDQRD RLVLQLSELV SVNTIEQDDG ALNVFIGNGQ 
NLVLGNRPTV LVADGLGPDP AQMQVGYVSP GATVDITSYM TGGRLGALLD LRTSVLDVAQ 
NSLGRTAIGL AQAFNDQHVL GQDLNGQLGE AFFRVPAPEA IAGASNAATG DLQVEIQDYS 
ALTLSDYRLR FDGADWQLRR EPGGQLLGAV APGGTLLIEG LSIDTSGIAG AATGDTFLIR 
PTRGGANQID TVISDPRMVA AASPVRASPD GDNTGPAIVR SVIAVDRDAL DLTPVTVTYN 
AGASQFEIGG DTYPLDPSGV TVINHNGWEL TIEGVPDDGD AFQVGPNIGG VGDNRNALAL 
AGLQDQRMMV GGTATLEGTY NTLVAEVGTR TRQAEIAARA QVKLLDEARA QRESISGVNL 
DEEAANLLRY QQAYQAAAQV ISVTNSLFDT LINAVRR