Gene Tgr7_1223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1223 
Symbol 
ID7315475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp1311398 
End bp1312087 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content66% 
IMG OID643616111 
Productflagellar L-ring protein 
Protein accessionYP_002513296 
Protein GI220934397 
COG category[N] Cell motility 
COG ID[COG2063] Flagellar basal body L-ring protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.555978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGCC AGAGCCTCAA GTCGATGCGT TCCGTCTCCC TGGTGCTGCT GGCCGGCCTG 
GTGCTGGGCG GCTGCGCCAG CGTCAACGGC GTGAAGCCCG GCGACAGTCC GGAATTTTCC 
GCGGTGAATC CGCCCATGCC CGTGCCGGCG GAATACAACA ACGGCGCCAT CTTCCAGGCC 
AGCTACGGCA CCGGCCTGTT CGAGGACTAC AAGGCCCGCC GCGTGGGCGA CATCCTCACG 
GTCCGGCTGG CCGAACGCAC CCAGGCGCGC AAGTCCGCGA ACACCAGCAC CAGCAAGGAA 
TCCAGCGTCA ACATGCCGAC CCCCACCGTG CTCAATCGCA CGATCCCCGA ACTGAGCACC 
AGCATCGAGG GCTCCCGTTC CTTCGACGGC GCGGGGGACA GCGCCCAGAG CAATCAGCTG 
GATGGCTCCA TCACCGTGAT GGTGGCCGAG GTCCTGCCCA ACGGAAACCT CGTGGTGCAG 
GGGGAGAAGT GGATCCGCAT CAACCAGGGC CAGGAGTTCA TCCGCCTGCG CGGCATCGTG 
CGTCCCGTGG ACGTGCGTGC CGACAACACC ATCCTCTCCA CCCAGATCGC CAATGCCCAG 
GTGGCCTATG GCGGCAGCGG CACCCTGGCC GACAGCAATT CCCCCGGCTG GCTGACCCGC 
TTCTTCAACA GTCCCGTGTG GCCCTTCTGA
 
Protein sequence
MNSQSLKSMR SVSLVLLAGL VLGGCASVNG VKPGDSPEFS AVNPPMPVPA EYNNGAIFQA 
SYGTGLFEDY KARRVGDILT VRLAERTQAR KSANTSTSKE SSVNMPTPTV LNRTIPELST 
SIEGSRSFDG AGDSAQSNQL DGSITVMVAE VLPNGNLVVQ GEKWIRINQG QEFIRLRGIV 
RPVDVRADNT ILSTQIANAQ VAYGGSGTLA DSNSPGWLTR FFNSPVWPF