| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1214 |
|---|
| Symbol | |
|---|
| ID | 7315466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 1304031 |
|---|
| End bp | 1304819 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643616102 |
|---|
| Product | Flagellar basal body P-ring biosynthesis protein-like protein |
|---|
| Protein accession | YP_002513287 |
|---|
| Protein GI | 220934388 |
|---|
| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1261] Flagellar basal body P-ring biosynthesis protein |
|---|
| TIGRFAM ID | [TIGR03170] flagella basal body P-ring formation protein FlgA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.974456 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGTGCT ATACCGTCAA CAACTCGACA CTCAGTGACC GGCCCGGGCC AGGACCCACG
GGCGGACCTC GCTCAAAGAC ACGCAGGGTC TCGGCCGCGG GCGTGTTGCT GTGCCTCACG
GCGTGGCTGA TCAGTACACC CGCGCTGGCC CACGAACCCC ACGAACGCAT CCTAGACACG
GCCACCCGCT ACATGGCTGA GCAGGCCCGC GCGGCCCACG GTGAGGCCTT CGAGGTCACG
GTCTCGCCGG GCCGCCTCGA TCCCCGCCTG CGCCTGCGCG CCTGCGAGCA GGGCCTGGAA
CCCTTCACCT CCCCGGGTGC CCGCCTGGCG GGCAACAGCA CCGTGGGCAT CCGCTGCCTG
GGCCCGGTGA CCTGGTCCCT GTACGTCCCC GTGCATGTGG CGGTCCATGG CGAGGTGGTG
GTCCTGGGCC ATCCCCTGCC CCGGGGCATG CAGCTGGAGG CCCAGCATCT GCGCCTGGAA
CGCCATGACG TCGGCGCCCT GCCCGGCGGC TACCTCAACG ACCTGGAACT GGCCCGGGAC
ATGGTCTTGC GCCGTGCCCT GCCCGCCGGT ACCGTGCTCA CGCCCCAGAT GGTAGAGCCC
CCCCGGCTGG TGCGCCGGGG TCAGCGGGTC ACCCTGCTGG CCGAAGGCAG CGCCGTGAAC
GTGCGGGTGG AAGGCGAGGC CCTGGCCGAC GGCAGCCGGG GCGAACGGGT CCAGGTGCGC
AACCTCTCCT CCCGTCGGGT GGTCGAAGGG GTCGTGCTCT CCCACGGTGT CGTGGGTGTT
AGAATGTGA
|
|---|
| Protein sequence | MMCYTVNNST LSDRPGPGPT GGPRSKTRRV SAAGVLLCLT AWLISTPALA HEPHERILDT
ATRYMAEQAR AAHGEAFEVT VSPGRLDPRL RLRACEQGLE PFTSPGARLA GNSTVGIRCL
GPVTWSLYVP VHVAVHGEVV VLGHPLPRGM QLEAQHLRLE RHDVGALPGG YLNDLELARD
MVLRRALPAG TVLTPQMVEP PRLVRRGQRV TLLAEGSAVN VRVEGEALAD GSRGERVQVR
NLSSRRVVEG VVLSHGVVGV RM
|
|---|
| |