Gene Tgr7_1187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1187 
Symbol 
ID7315438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp1280150 
End bp1280632 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content68% 
IMG OID643616074 
Product2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
Protein accessionYP_002513260 
Protein GI220934361 
COG category[I] Lipid transport and metabolism 
COG ID[COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
TIGRFAM ID[TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.605646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAATA TACGCATCGG ACACGGTTAC GACGTGCACG CCTTCAAGGC GGGGGGCCAC 
GTGGTGCTGG GGGGCGTACG CATTCCTCAC GCCAAGGCCT TCGCCGCTCA TTCCGATGGC 
GACGTACTGA TCCATGCCCT GTGCGATGCC CTCTTGGGCG CGGCGGCGCT GGGGGACATC 
GGCCGGCATT TCCCGGACAC GGACCCGGCC TACAAGGGCG CCGACAGCCG GGTGCTGCTG 
CGCCGGGTGG TGGAACTGCT GCATGAGCAG GGTTACCGGG TGGGCAACGT GGACGCCACG 
ATCATCGCCC AGGCGCCGAA GATGGCCCCG CACATCGAGG CCATGCGCGC CAACCTGGCC 
GACGACCTGG GCGTCGCCCT GGAGTGCGTC AACGTCAAGG CCACCACCAC CGAGCGCCTC 
GGCTTCGCCG GCCGCGAGGA AGGCATCGCC GCACATGCGG TGGCCTTGAT TGAGTCATTC 
TGA
 
Protein sequence
MANIRIGHGY DVHAFKAGGH VVLGGVRIPH AKAFAAHSDG DVLIHALCDA LLGAAALGDI 
GRHFPDTDPA YKGADSRVLL RRVVELLHEQ GYRVGNVDAT IIAQAPKMAP HIEAMRANLA 
DDLGVALECV NVKATTTERL GFAGREEGIA AHAVALIESF