| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1172 |
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| Symbol | |
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| ID | 7315423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 1261005 |
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| End bp | 1262171 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643616059 |
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| Product | Lipid-A-disaccharide synthase |
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| Protein accession | YP_002513245 |
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| Protein GI | 220934346 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATCGC CTGAGCCCAG TCACGACCAT GTGATGGTGG TGGCGGGTGA GGCCTCCGGC
GACCTGCACG CCGCCAACAT GGTGCGCGCC CTGCGCCGCC TGCGCCCGGA ACTGCGCTTC
TCCGGCATGG GCGGCGGTGC ACTCAGGGAT GCGGGCGTGG AGATCCTGGT GGACAGCACC
CGCCTGGCGG TGGTGGGCCT GGTGGAGGTG CTGGCCCATT ACGGTGATAT CCGCCGGGCC
CTGAACACCC TCAAGCACAG CATCGAGCGG GAGCCTCCGC GCCTGCTGGT GCTGGTGGAT
TACGTGGAGT TCAACCTGCG CCTGGCCCGC TTCGCCAAGG GCAAGGGCGT GAAGGTGCTG
TTCTACGTCA GCCCCCAGGT CTGGGCCTGG CGCGCGCGCC GGGTGCGGCG CATCGGCCAG
GTGATCGACG CCATGGCCGT GCTGTTTCCC TTCGAGGAGG CGGTCTATCG CAAGCATGGC
ATTCCGGTGC GCTACGTGGG CAACCCGCTG GTAGACGAGG TGCGGGCCTC GGCGGACTGC
TACACCCTGC GCCGCGGCTT CGGCCTCAAC GAGACCGCCC CGGTGGTGGG CATCCTGCCC
GGCAGCCGTC GCGGTGAGCT GCGCCGTCAC CTGCCCCTGA TCATGGAATC CGCCCGGCTG
CTGCGCAGCC GCATCCCCAG CGTGCAGTTC ATCATGCCCA TCGCCCCCGG CGTGGACGTG
GAGCGGGATG TCACGTCCCA CGTGGACGGC AGCCTGGGCA TCGTGCAGGT GAGTGGTCGC
ACCTACGACG CCATGCACGC CAGCGATGCC CTGATGATCG CATCGGGCAC CGCCACCCTG
GAAGCGGGCC TGCTGCGGGT GCCCATGGCC ATCCTCTACC GGGTCTCACC GATCACCTAC
GCCATCCTCA AGCGACTGAT CCTGATCCGT GACATCGGGC TGGCCAACAT CGTTGCCGGC
GAACGGGTGG TACCGGAATT CATCCAGCAC GAAGCCACCC CCGAGGCCAT CACCGGTGAG
ATCGAGCGCC TGCTGACGGA CAACGACTAC GCGCGCCAGG TGCGCGAACG CCTCGGGATC
ATCCGGGAAA GACTGGGGGA AGGCGGGGGA TCGGAGAATG TGGCGCGGAT GGCGCTGGAA
CTGATCGACA CCGGGAAACT GGATTGA
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| Protein sequence | MPSPEPSHDH VMVVAGEASG DLHAANMVRA LRRLRPELRF SGMGGGALRD AGVEILVDST
RLAVVGLVEV LAHYGDIRRA LNTLKHSIER EPPRLLVLVD YVEFNLRLAR FAKGKGVKVL
FYVSPQVWAW RARRVRRIGQ VIDAMAVLFP FEEAVYRKHG IPVRYVGNPL VDEVRASADC
YTLRRGFGLN ETAPVVGILP GSRRGELRRH LPLIMESARL LRSRIPSVQF IMPIAPGVDV
ERDVTSHVDG SLGIVQVSGR TYDAMHASDA LMIASGTATL EAGLLRVPMA ILYRVSPITY
AILKRLILIR DIGLANIVAG ERVVPEFIQH EATPEAITGE IERLLTDNDY ARQVRERLGI
IRERLGEGGG SENVARMALE LIDTGKLD
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