| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1165 |
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| Symbol | |
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| ID | 7315416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1252962 |
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| End bp | 1254188 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643616052 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_002513238 |
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| Protein GI | 220934339 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATGC AAGACGAGCC CGTGCGCCGT GGCGTGACCA TCCTGGGTTC CACCGGCACC
ATCGGGGTGA ACACCCTGGA TGTGCTGGCC AGACACCCGC AGGCCTATCG CGTGGTGGCG
CTCACGGCCA ATGACAACGT GGAACGCCTG GCGCAGCAGT GTCGCGACTT CCGGCCCGAC
TACGCCGTGG TGGTGAGCGC GGACGGCGCC GAACGCCTGG AGCGCGAGCT CGCGGCCGAA
GGACTTCCCA CCCGGGTGCT GTGCGGTGCC GAGGCCCTGG TGCAGGTGGC CGCCCTTCCG
GAGACCGACT ACGTGATGGC GGGCATCGTG GGCGCCGCGG GCCTGATGCC GACCCTGGCG
GCAGCCCGGG CCGGCAAGCG GGTCATGCTG GCCAACAAGG AGGCCCTGGT CATGTCCGGG
CAGCTGTTCA TGGACGAGAT CCATGCCAGC GGCGCGGAGC TGCTGCCCAT CGACAGTGAG
CACAACGCCA TCTTCCAGTG TATGCCGGCG GATTTCGCCC GGGGACTCGA TCGGGTCGGC
GTGGAGCGCA TCCTGCTGAC CGCCTCCGGC GGGCCGTTTC GCACCTTAAG CCCCGAGGCC
CTGGCCGGTG TGACCCCGGA GCAGGCCTGT GCCCACCCCA ACTGGGTGAT GGGCCGCAAG
ATCTCGGTGG ATTCCGCCAC CATGATGAAC AAGGGCCTGG AGGTGATCGA GGCCTGCTGG
CTGTTCGGCA CCGGCACCGA GCGGGTGGAG GTGGTGCTGC ATCCCCAGAG CGTGATCCAC
TCCATGGTTT CCTACAGCGA CGGCTCCGTG CTGGCGCAGC TGGGCAATCC GGACATGCGC
ACCCCGATCG CCCACGCCCT GGCCTGGCCG GAGCGCATCG CCTCCGGGGT GGCGCCCCTG
GACATGGTGG CCATCGCCCG ACTGGACTTC GAGCGTCCGG ATCTGGGGCG TTTCCCCTGC
CTGCGACTGG CCTACCAGGC CTTCCAGGTG GGCGGTACCG CCACCGCCGT GCTCAACGCC
GCCAACGAGG TGGCGGTCGC GGCCTTCCTG GACAGCCGGC TGGCCTTCAC GGACATCGCC
AAGGTGATCG AACACAGCCT GGAGCAGGTG AGCACCGGCC CTGCCTCGGA CCTGGAACGG
GTGCTCAAGG CCGATGAGGC CGCCCGCCAG GTCGCCCGGG AACGCATTGC GGGCATCGGC
GGACTGCGTA TGGGACAGGC CTCATGA
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| Protein sequence | MTMQDEPVRR GVTILGSTGT IGVNTLDVLA RHPQAYRVVA LTANDNVERL AQQCRDFRPD
YAVVVSADGA ERLERELAAE GLPTRVLCGA EALVQVAALP ETDYVMAGIV GAAGLMPTLA
AARAGKRVML ANKEALVMSG QLFMDEIHAS GAELLPIDSE HNAIFQCMPA DFARGLDRVG
VERILLTASG GPFRTLSPEA LAGVTPEQAC AHPNWVMGRK ISVDSATMMN KGLEVIEACW
LFGTGTERVE VVLHPQSVIH SMVSYSDGSV LAQLGNPDMR TPIAHALAWP ERIASGVAPL
DMVAIARLDF ERPDLGRFPC LRLAYQAFQV GGTATAVLNA ANEVAVAAFL DSRLAFTDIA
KVIEHSLEQV STGPASDLER VLKADEAARQ VARERIAGIG GLRMGQAS
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