| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1163 |
|---|
| Symbol | |
|---|
| ID | 7315414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 1251139 |
|---|
| End bp | 1251924 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643616050 |
|---|
| Product | undecaprenyl diphosphate synthase |
|---|
| Protein accession | YP_002513236 |
|---|
| Protein GI | 220934337 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGACACG ACACTAGGCC CCGTCGTTTC GATTCCGTGA GTCCAGCCCC CGCCGACAGC
GCCGTCATCC CCCGGCACGT GGCCATCATC ATGGATGGCA ACGGCCGCTG GGCGCGCGCG
CGCCATCTGC CCCGCACCGA GGGTCATCGC CAGGGCGTGC ATGCCACCCG CACGGCGGTG
CGCTTCTGCG CCGCCCGCGG GGTCCAGGCC CTGACCCTGT TCGCCTTCAG CAGCGAGAAC
TGGAAGCGCC CCTCCGCCGA GGTCAACACC CTGATGAGCC TGTTCGTCAG CGCCCTGGAG
AAGGAGCTGC CGGAGCTGGT GCAGAACAAC ATCCGCCTGC GCTTCATCGG CGAGCGCGAG
GCCTTCTCCG ACAAGCTCAA ACATCGTATC CACGAGGCGG AGGCCGCCAC TCGGGACAAT
ACCGGCATGG AGCTGGTGAT CGCGGTGAGT TATGGCGGGC GCTGGGACAT CACCGCCGCC
GTGCGGTGCC TGGCGGTCGA GGTGGCCGAG GGGCGGCTCG ACCCGGCGTC CATCAGTGTC
GAGACCCTGG ACAGGCAGCT GTCCACCGCG GGCCTGCCCG ACCCGGATCT GTTCATCCGC
ACCGGCGGCG AGCGTCGCCT GAGCAATTTC CTGCTCTGGC AGCTGGCCTA CACGGAGCTC
TACTTCTGCG ACGTGCTCTG GCCCGACTTT GACGAGGACG CGCTGCAGGC GGCCTTCGAA
TTCTTTGCCG GCCGGGAGCG CCGCTTCGGC CGGACCGGGG AGCAGGTGAG CCATGAGCGT
GCTTAG
|
|---|
| Protein sequence | MGHDTRPRRF DSVSPAPADS AVIPRHVAII MDGNGRWARA RHLPRTEGHR QGVHATRTAV
RFCAARGVQA LTLFAFSSEN WKRPSAEVNT LMSLFVSALE KELPELVQNN IRLRFIGERE
AFSDKLKHRI HEAEAATRDN TGMELVIAVS YGGRWDITAA VRCLAVEVAE GRLDPASISV
ETLDRQLSTA GLPDPDLFIR TGGERRLSNF LLWQLAYTEL YFCDVLWPDF DEDALQAAFE
FFAGRERRFG RTGEQVSHER A
|
|---|
| |