| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1152 |
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| Symbol | dapD |
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| ID | 7315861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 1239294 |
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| End bp | 1240115 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643616039 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_002513225 |
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| Protein GI | 220934326 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGC TTCAGGAGAT CATCATCGAG GCCTTCGAGC GCCGCGCCGA CATCACCCCG
CGCAACGTGG AGACCCACGT GAAGGACGCC GTCATGGAAG CCATCGACAT GCTGGACCGG
GGCACCGCCC GGGTGGCGGA GAAGAAGGAC GGTGAATGGA TCGTCAACGA CTGGCTGAAG
AAGGCCGTGC TGCTGTCCTT CCGCATCCAC GACAACCAGT TCATCAAGGG CGGCTTCACC
AACTACTACG ACAAGGTGCC CTCCAAGTGG GCCGACGCCA ACTCCCGGGA CTTCCGCGAG
GGCGGCGCCC GGGTCGTGCC CCCGGCCACC GCGCGCAAGG GCTCCTACAT CGCCCCCGGC
GTGGTCCTCA TGCCCTCCTA CGTGAACATC GGCGCCTACG TGGACTCCGG CACCATGGTG
GACACCTGGG CCACCGTGGG TTCCTGCGCA CAGATCGGCA AAAACGTGCA CCTGTCCGGC
GGTGTGGGCA TCGGTGGCGT GCTGGAGCCC CTGCAGGCCG CCCCCACCAT CATCGAGGAC
AACTGCTTCA TCGGCGCCCG CTCCGAGGTG GTGGAAGGCG TGATCGTGGA AGAGGGTTCG
GTGATCTCCA TGGGCGTGTA CATCGGCCAG AGTACCCGCA TCTACGACCG CGAGAAGGAC
GAGATCCTCT ACGGCCGCGT GCCCGCCGGC TCCGTGGTGG TCTCCGGCAA CCTGCCCTCC
AAGGACGGCA AGTACAGCCT GTACTGCGCG GTGATCGTCA AGAAGGTGGA CGAGAAGACC
CGCTCCAAGG TAGGTATCAA CGAACTGCTG CGGGACATTT GA
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| Protein sequence | MSKLQEIIIE AFERRADITP RNVETHVKDA VMEAIDMLDR GTARVAEKKD GEWIVNDWLK
KAVLLSFRIH DNQFIKGGFT NYYDKVPSKW ADANSRDFRE GGARVVPPAT ARKGSYIAPG
VVLMPSYVNI GAYVDSGTMV DTWATVGSCA QIGKNVHLSG GVGIGGVLEP LQAAPTIIED
NCFIGARSEV VEGVIVEEGS VISMGVYIGQ STRIYDREKD EILYGRVPAG SVVVSGNLPS
KDGKYSLYCA VIVKKVDEKT RSKVGINELL RDI
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