| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1146 |
|---|
| Symbol | |
|---|
| ID | 7315855 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 1233135 |
|---|
| End bp | 1234436 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643616033 |
|---|
| Product | thiol-disulfide isomerase and thioredoxins-like protein |
|---|
| Protein accession | YP_002513219 |
|---|
| Protein GI | 220934320 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.299964 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCCCGAC GACCGAGCCT GTGCCTCGCG CTGCTCCTGC TCTTCAGCCT GCCCCATGCC
GTTCTCGCCG ACTTCAGCCT GGACCTGCCG GACGGCGAGC GCCTGGACGT GCGCGTCTGG
GGCGAGGACA ACACCGGCCC CCTGTTCGTC TGGCTCATCA ACCAGTACGG CGAGACCGAA
GGGCCCCACA ACCTGGCCCG GCGTCTGGCC GAGCGCAATG CCACGGTCTG GCAGGTGGAC
CTGCTGGACT CCCTGCTGCT TCAGCGCAGC AACGAGGTGG TGCGCAACCT GGACGGCGCA
CCGGTGGCGG CCTTGTTGCA CGAGGCCGTG GACAGCGGCC GCGGACCCAT CGTGGTCACC
ACCTGCGACC GCATGACCGT GCCCCTGCTG CGGGGCCTGC GGGCCTGGCA GGAAGAGGCC
ACCGACATGA ACGCCGTGGC CGGCGGCATC CTGTTCTTCC CCAACCTCTA CCGGGGCACC
CCGGTGGCCG GCGAGGAGCC GGAGCTGCTG GGCATCGTCT CCGCCACCAA CATGCCGCTC
GCCATCCTGC AGCCGGAACT GGGCACCAAC CGCCCGCGCC TGGAGGCGCT GCTGGCCACC
CTGCACCGGG CCGGCAGCCC CGCCTACGGC TGGCTGGTGG ACAGCGTGCG GGACTACTAC
CTGCTGCGCT CCGTCGAGCC CGAAGCGGTG GAACTGGAGG CCATGGGCGG CCCGATCCCC
TTCGACGTGA CCCGCGCCAT CCTGGACACC CCCACCCAGC TGCTGGCGGC CACCCGGCTG
CTGGCCCAGA CCCCGCGCCC GGACCGTCCC GCGCCCCTGG ACGAGGAGGC CGAGGCGCCG
GTGCTGCCGG CCTTTGGCCT GGTGGAACGG CCGGCCTACG ACCCGCCCGG CTATGACCTG
GTGGATGCCC GGGGCGTGCG CCATCAGCAC ACCGAGAGCC TGGGGCGGGT CACCCTGGTG
AACTTCTGGG CCACCTGGTG CCCGCCCTGC GTGCACGAGA TCCCGTCCAT GAACCGCCTG
GCCGCCGCCT ACCCGGAAGA CGAGTTCGCC ATCGTCTCCA TCAACTTCCG GGAATCCCCG
GCGCACGTTC TGAACTTCAT GGAAGACGTG AACGTGGACT TCCCCGTGCT CATGGACGAG
GACGGCGCGG TCTCGGGCGA GTGGCGGGTA TTCGCCTTCC CCAGCTCCTT CCTGCTGGAC
CGCCAGGGTC GGGTGCGCTA CTCGGTGAAC ACGGCCATCG AGTGGGATAC AGACGAGGTG
CGGGAGGTCA TCGACCGGCT GAGGGCCGAG GATACTTATT GA
|
|---|
| Protein sequence | MPRRPSLCLA LLLLFSLPHA VLADFSLDLP DGERLDVRVW GEDNTGPLFV WLINQYGETE
GPHNLARRLA ERNATVWQVD LLDSLLLQRS NEVVRNLDGA PVAALLHEAV DSGRGPIVVT
TCDRMTVPLL RGLRAWQEEA TDMNAVAGGI LFFPNLYRGT PVAGEEPELL GIVSATNMPL
AILQPELGTN RPRLEALLAT LHRAGSPAYG WLVDSVRDYY LLRSVEPEAV ELEAMGGPIP
FDVTRAILDT PTQLLAATRL LAQTPRPDRP APLDEEAEAP VLPAFGLVER PAYDPPGYDL
VDARGVRHQH TESLGRVTLV NFWATWCPPC VHEIPSMNRL AAAYPEDEFA IVSINFRESP
AHVLNFMEDV NVDFPVLMDE DGAVSGEWRV FAFPSSFLLD RQGRVRYSVN TAIEWDTDEV
REVIDRLRAE DTY
|
|---|
| |