Gene Tgr7_1143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1143 
Symbol 
ID7315852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp1228951 
End bp1229604 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content66% 
IMG OID643616030 
Productprotein of unknown function DUF502 
Protein accessionYP_002513216 
Protein GI220934317 
COG category[S] Function unknown 
COG ID[COG2928] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCACA CCCTGCGCAA GTACCTGATC ACCGGTCTGG TGGTCTGGGT GCCCCTGGTC 
ATCACCTTCT TCGTGGTGAA GTTCCTGGTG GACCTGATGG ACAACAGCCT GCTGCTGTTG 
CCCCCGGCCT GGCGTCCCGA GGCCCTGTTC GGCTTCAAGA TCCCGGGCCT GGGGGTGGTG 
CTGGCGGCGG TGATCCTGCT GGTCACAGGC CTGGTCACCG CCAACCTGCT GGGCCGCAAG 
CTGGTGGACC TGTGGGAGAG CGTGCTGCAG CGCATTCCCC TGGTGCGCAG CATCTACTCG 
GCGGTCAAGC AGGTGATGGA GACCCTGCTG GGGGCGGGCG GGGATTCCTT CCGCAAGGTG 
CTGATGATCG AGTACCCGCG CAAGGGGATC TGGACGTTGG GTTTCCAGAC CGGCGTGGGG 
GTGGGGGAGG TGCAGTCGCG CACCAGCAAG GAGGTGGTGA CGGTGTTCGT GCCCACCACG 
CCCAACCCCA CCTCCGGTTT CATCATCCTG GTGCCCCGGG ACGAGGTGGT GGAGCTGGAC 
ATGTCCGTGG AGGACGGTCT GAAGTTCGTC ATGTCCCTGG GCGTGGTCAG TCCCCGCTGG 
CCGTACCCGA ACCGCCCGCC ATCAAATGGC GAGCAGAGGC GCGGGGGTTT CTGA
 
Protein sequence
MLHTLRKYLI TGLVVWVPLV ITFFVVKFLV DLMDNSLLLL PPAWRPEALF GFKIPGLGVV 
LAAVILLVTG LVTANLLGRK LVDLWESVLQ RIPLVRSIYS AVKQVMETLL GAGGDSFRKV 
LMIEYPRKGI WTLGFQTGVG VGEVQSRTSK EVVTVFVPTT PNPTSGFIIL VPRDEVVELD 
MSVEDGLKFV MSLGVVSPRW PYPNRPPSNG EQRRGGF