Gene Tgr7_1128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1128 
Symbol 
ID7315837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp1214209 
End bp1215273 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content70% 
IMG OID643616015 
Productefflux transporter, RND family, MFP subunit 
Protein accessionYP_002513201 
Protein GI220934302 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.180858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAGC AGGGAAACCG GACCGTGTTC AGCACGGGCC TGATGGTGGT GGCAGGCTGG 
GGGCTGGGCG TCCTCGTCCA GGCGAGTGCG TCAGTGCCGT TCGAGACCCT CCGGGTGGAA
CAGCAGCTCA CCGTGCAGGA GAAGGTGGTG GACGGGCGCA TCGAGGCGGT GCAGCAGGCC
ACCATCACGG CCCAGACCTC CGGGCGCATC GTGGAGCTGC TCTACGACGT GGACGACTTC
GTGGAGGCGG GTGCCGTCAT CGCCCGTCTG CGTGACACCG AGCAGCGGGC GCGCCTGAAC
CAGGCCACGG CCTCCCTGCG CGAGGCCCAG GCCCGTTTCA ACGAGGCGGA GACCGAGTTC
GAGCGCATCC GGGGGATCTT CGAACGCCAG CTGGTGGCCC GCGCCGAGAT GGACCGGGCC
ACCGCGTCCC TGGAGGCCGC CCGGGCCAGG CTGGAGGCGG CCCGGGCCGC CGTGGCGGAG
GCCGAGGAGC AGGTGGAGTA CACCCGCATC CGCGCCCCCT ATGCGGGCAT CGTCACTGAA
CGTTTCGTGG AGGTGGGCGA GAGCGTGAGT CCAGGCCAGC CGCTGATCGC CGGGATCTCG
CTGGAATTCC TGCGGGTCAC CGCCGAGGTG CCCCAGCGTC ACATACAGAC CGTGCGCGAG
CTGGGCCGCG CCCGGGTGCT CCATGACGGA ACCGCCGCCG TGGAGGCCGA GCAGCTGACC
TTCTTCCCCT ATGCCGATCC GGCCACCAAC ACCTTCCGGG TGCGGGTGCA GTTGCCGCCC
GGCATCGAGG GCCTTTTCCC GGGCATGTTC GTCAAGGTGG CCTTCGCCGT GGGCGAGCGC
GAGCGTCTGA TGATCCCGGC CAGCGCGGTG GTCTACCGGG GCGAGATGGT GGGTGTCTAC
GTGGTGGACG AGGCCGGGCG CGTGAGCCTG CGCCAGGTGC GCGTGGGACG GGTGGACAAT
GACCAGATCG AGGTGCTGGC GGGACTGGAG CCCGGTGAAC AGCTGGCCCT GGATCCGGTG
CATGCGACCC TGCATCTGAA GCGCCAGCAG GAGGCGGCCC GATGA
 
Protein sequence
MSKQGNRTVF STGLMVVAGW GLGVLVQASA SVPFETLRVE QQLTVQEKVV DGRIEAVQQA 
TITAQTSGRI VELLYDVDDF VEAGAVIARL RDTEQRARLN QATASLREAQ ARFNEAETEF
ERIRGIFERQ LVARAEMDRA TASLEAARAR LEAARAAVAE AEEQVEYTRI RAPYAGIVTE
RFVEVGESVS PGQPLIAGIS LEFLRVTAEV PQRHIQTVRE LGRARVLHDG TAAVEAEQLT
FFPYADPATN TFRVRVQLPP GIEGLFPGMF VKVAFAVGER ERLMIPASAV VYRGEMVGVY
VVDEAGRVSL RQVRVGRVDN DQIEVLAGLE PGEQLALDPV HATLHLKRQQ EAAR