Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_1128 |
Symbol | |
ID | 7315837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 1214209 |
End bp | 1215273 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643616015 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_002513201 |
Protein GI | 220934302 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.180858 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAGC AGGGAAACCG GACCGTGTTC AGCACGGGCC TGATGGTGGT GGCAGGCTGG GGGCTGGGCG TCCTCGTCCA GGCGAGTGCG TCAGTGCCGT TCGAGACCCT CCGGGTGGAA CAGCAGCTCA CCGTGCAGGA GAAGGTGGTG GACGGGCGCA TCGAGGCGGT GCAGCAGGCC ACCATCACGG CCCAGACCTC CGGGCGCATC GTGGAGCTGC TCTACGACGT GGACGACTTC GTGGAGGCGG GTGCCGTCAT CGCCCGTCTG CGTGACACCG AGCAGCGGGC GCGCCTGAAC CAGGCCACGG CCTCCCTGCG CGAGGCCCAG GCCCGTTTCA ACGAGGCGGA GACCGAGTTC GAGCGCATCC GGGGGATCTT CGAACGCCAG CTGGTGGCCC GCGCCGAGAT GGACCGGGCC ACCGCGTCCC TGGAGGCCGC CCGGGCCAGG CTGGAGGCGG CCCGGGCCGC CGTGGCGGAG GCCGAGGAGC AGGTGGAGTA CACCCGCATC CGCGCCCCCT ATGCGGGCAT CGTCACTGAA CGTTTCGTGG AGGTGGGCGA GAGCGTGAGT CCAGGCCAGC CGCTGATCGC CGGGATCTCG CTGGAATTCC TGCGGGTCAC CGCCGAGGTG CCCCAGCGTC ACATACAGAC CGTGCGCGAG CTGGGCCGCG CCCGGGTGCT CCATGACGGA ACCGCCGCCG TGGAGGCCGA GCAGCTGACC TTCTTCCCCT ATGCCGATCC GGCCACCAAC ACCTTCCGGG TGCGGGTGCA GTTGCCGCCC GGCATCGAGG GCCTTTTCCC GGGCATGTTC GTCAAGGTGG CCTTCGCCGT GGGCGAGCGC GAGCGTCTGA TGATCCCGGC CAGCGCGGTG GTCTACCGGG GCGAGATGGT GGGTGTCTAC GTGGTGGACG AGGCCGGGCG CGTGAGCCTG CGCCAGGTGC GCGTGGGACG GGTGGACAAT GACCAGATCG AGGTGCTGGC GGGACTGGAG CCCGGTGAAC AGCTGGCCCT GGATCCGGTG CATGCGACCC TGCATCTGAA GCGCCAGCAG GAGGCGGCCC GATGA
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Protein sequence | MSKQGNRTVF STGLMVVAGW GLGVLVQASA SVPFETLRVE QQLTVQEKVV DGRIEAVQQA TITAQTSGRI VELLYDVDDF VEAGAVIARL RDTEQRARLN QATASLREAQ ARFNEAETEF ERIRGIFERQ LVARAEMDRA TASLEAARAR LEAARAAVAE AEEQVEYTRI RAPYAGIVTE RFVEVGESVS PGQPLIAGIS LEFLRVTAEV PQRHIQTVRE LGRARVLHDG TAAVEAEQLT FFPYADPATN TFRVRVQLPP GIEGLFPGMF VKVAFAVGER ERLMIPASAV VYRGEMVGVY VVDEAGRVSL RQVRVGRVDN DQIEVLAGLE PGEQLALDPV HATLHLKRQQ EAAR
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