| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1125 |
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| Symbol | |
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| ID | 7315834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 1211245 |
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| End bp | 1212969 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643616012 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_002513198 |
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| Protein GI | 220934299 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0610859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGCAA CCCGATTCCC CCTGGCCACC CTCAAGGAAA CCCCCGCCGA CGCCGAAGTG
ATCAGCCACC AGCTGATGCT GCGTGCCGGC ATGATCCGGC GCCTGGCCTC GGGTCTGTAC
AGCTGGACGC CGCTCGGCCT GCGGGTGCTG CGCAAGGTGG AAGGCCTGGT GCGCGATGAG
ATGGACCGGG CCGGGGCCCT GGAACTGCTC ATGCCCGCGG TGCAGCCCGC GGAGCTGTGG
CAGGAGTCCG GGCGCTGGGA ACAGTACGGA CCCGAGCTGC TGCGCCTGAA GGACCGGCAC
ATGCGCGAGT TCTGCTTCGG CCCCACCCAC GAGGAGGTGA TCACCGACTA CGTGCGCCGG
GAGGTGAAGA GCTACCGCCA GCTGCCGGTG AACTACTACC AGATCCAGAC CAAGTTCCGC
GACGAGATCC GCCCCCGCTT CGGCGTGATG CGCGCCCGCG AGTTCCTCAT GAAGGACGCC
TACTCCTTCC ACGTGGACGA GGACAGCCTG AAGGAGACCT ACGCGCGCAT GCACGAGGCC
TACACGCGCA TCTTCACCCG TTGCGGACTG GACTTCCGCG CCGTGCTGGC CGACACCGGC
TCCATCGGCG GCAATGCCTC CCATGAATTC CACGTACTGG CCGATTCCGG CGAGGACGCC
ATCGCCTTCT CCGATGTGAG CGACTACGCC GCCAACGTTG AACTGGCCGA GGCGGTGGCG
CCCGCCACCG AGCGCGCGGC GCCCGGCGAG GCCATGCGCC TGGTGGACAC CCCGAACGCG
CGCACCATCG CCGATCTCGT GGAACAGCAC GGTCTGGCCA TCGAGAAGAC CGTGAAGACC
CTGGTGGTGG CCGCCGCCGA GGGCGCCGAG GCGCCGCTGA TCGCGCTGCT GGTACGCGGC
GATCACGAAC TCAACGCCAT CAAGGCGGAG AAGCTACCCC AGGTGGCGAG CCCCCTGCGC
ATGGCCACGG AGGAAGAGAT CCGCGCCGCC ATCGGTGCCG GCCCCGGCTC TCTGGGCCCC
GTGAACCTGC CCATCCCCTG CGTGGTGGAC CGGGCGGTGG CGCTGATGAG CGACTTCGGC
GCCGGCGCCA ACATCGACGG CAAGCACTAC TTCGGCATCA ACTGGGAGCG GGACCTGGCC
CTGCCCCCGG TGGCCGACCT GCGCAACGTG GTGGCCGGCG ATCCGAGCCC CGACGGCCAG
GGCAGCCTGC AGATCCGCCG CGGCATCGAG GTGGGCCACA TCTTCCAGCT GGGGCGCAAG
TACAGCGAGG CCATGGGCGC TACGGTGCTG GACGAACAGG GCCGTTCCCT GGTGGTCACC
ATGGGCTGCT ACGGCATCGG CGTCTCCCGG GTGGTGGCCG CCGCCATCGA ACAGAACCAT
GACGCCCAGG GCATCATCTG GCCCGAGGCC CTGGCCCCCT TCACCGTGGC CCTGTGCCCC
ATCAACGCCC AGAAGTCCCA GCGCCTGCGC GAGGCCGCCG ATGCGCTGTA CGAACGGCTG
CTGAATGCAG GCTTTGAGGT GTTCTACGAC GACCGCGGTC TGCGACCCGG CGCCATGTTC
GCGGACATGG AGCTGATCGG CATTCCCCAT CGCCTGGTGC TGGGCGAACG GGGCCTGGAC
GCCGGCGAGA TCGAGTACAA GGGCCGGCGT GATACGGACA CCACCCAGGT GGCCCTGGAC
GGCGTGCTGG ATTTCCTGCG CCAGCGCATG AACGCCGCCC ACTGA
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| Protein sequence | MRATRFPLAT LKETPADAEV ISHQLMLRAG MIRRLASGLY SWTPLGLRVL RKVEGLVRDE
MDRAGALELL MPAVQPAELW QESGRWEQYG PELLRLKDRH MREFCFGPTH EEVITDYVRR
EVKSYRQLPV NYYQIQTKFR DEIRPRFGVM RAREFLMKDA YSFHVDEDSL KETYARMHEA
YTRIFTRCGL DFRAVLADTG SIGGNASHEF HVLADSGEDA IAFSDVSDYA ANVELAEAVA
PATERAAPGE AMRLVDTPNA RTIADLVEQH GLAIEKTVKT LVVAAAEGAE APLIALLVRG
DHELNAIKAE KLPQVASPLR MATEEEIRAA IGAGPGSLGP VNLPIPCVVD RAVALMSDFG
AGANIDGKHY FGINWERDLA LPPVADLRNV VAGDPSPDGQ GSLQIRRGIE VGHIFQLGRK
YSEAMGATVL DEQGRSLVVT MGCYGIGVSR VVAAAIEQNH DAQGIIWPEA LAPFTVALCP
INAQKSQRLR EAADALYERL LNAGFEVFYD DRGLRPGAMF ADMELIGIPH RLVLGERGLD
AGEIEYKGRR DTDTTQVALD GVLDFLRQRM NAAH
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