| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1110 |
|---|
| Symbol | |
|---|
| ID | 7315819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 1194360 |
|---|
| End bp | 1195856 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643615997 |
|---|
| Product | amidohydrolase 2 |
|---|
| Protein accession | YP_002513183 |
|---|
| Protein GI | 220934284 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGTT TCCTGAGCCC CGAAGAGATC GCCGAACTGC AGCCCTCCGA GCTGCTGCCC
AACGAGACCC CCATCCCCAC CCAGATCGTC TCCAGCGACG AGTTCTATCC CACCCCCCAG
ACCGGGCCCC AGAAGCAGGT GGAGGCCCGC CTGCTGGCCA TGGCGGACGA GCTGGGCAGC
CACCAGGGCA TGAACCGGCG CCAGTTCTTC CGCTCCGCCG CGGGCATGGC GGCGGCCTTC
GTGGCCATGA ACGAGGTCTA CGGCCTGGTG TTCGGCGCCA GCCGCGCCGA GGCGGCCTCC
CCGGAGCTGG CCAACGAGCG CGCGGGCACC TACCGGGACC AGTTCATCAT GGACATGCAC
ACCCACTTCC TGCGCGATGA CACGCGCCTG GAGCGCTTCG TGCGCATGCG CGAGGCGGTG
GGCCGGGCCG GCTGGAACAA GCCCCTGGGC GAGCGGGAAC AGACCCTGGA GGATCTCAAG
TACGAGAACT ATCTCAAGGA GATCTACCTG GACAGCGACA CCAAGATCGC GCTGATCTCA
AGCTCCCCCT CCGACGAGGC CCAGGACTGG TTTCTCACCA ACGAGCAGAT GGCCGAGGCC
CGGGAGAAGG TCAACGCCCA CGCCGGCAGC AAGCGCCTCT ACACCCATGC CATCTTCACC
CCCGGGCAGC CCGGCTGGCT GGAACAGCTG GACGCTGCCC TGGAACTCAA ACCCGATTCG
GTCAAGGGCT ACACCGTGGG TGACAACACC CACAAGGCCA CCAGCCGCTA TCCCTGGCGC
ATGGACGACG AGCAGGTGGC CTACAAGGGT TACGAGAAGA TGCTCAAGGC CGGCGTGAAG
AACGTGTGCG TGCACAAGGG GCTGTTCCCC CCCTCCATGG ACGAGCGCTA TCCGCATCTG
CGCGACTACG CCGACGTGCG CGACGTGGCC CAGGCGGCCA AGGACTGGCC GGACCTGAAC
TTCATCATCT ACCACTCCGG CTACCGCCAC GTGGGCGGCG ATCCGGCGGT GGCCCTGCAG
GAATTCGAGA CCACCGGGCG CATCGACTGG GTCAGCGACC TGGCGGACAT TCCCGAGAAG
TACGGGGTGA GCAATGTCTA CGGTGATCTC GGCCAGGTGT TCGCCACCAC CCTGGTGGCC
CAGCCGCGGG TCTGCGCCGC CATCATGGGT ATCCTGGTCC GGGGCCTGGG CGCCGATCAC
GTATGCTGGG GCACCGACGC CATCTGGACC GGCTCGCCCC AGTGGCAGAT CGAGGGCCTG
CGCCGCCTGG AGATCCCCGA GGATATGCGC CGCCGCCATG GCTTCGCGGA ACTGGGTGCC
GCCGACGGCG CGGTGAAGAA CGCGATTTTC GGTGGCAACA ACGCCCGGCT CTACGGCCTG
AGCGAGCAGG CGCGCCGTGC CTTCGCCGGC GACCGCATGG CCGCTATCAA GGCGGACTAC
GAGCGCAACG GCGCCGAGCG CAGCAACCTG CGCTACGGCT ACGTGGCCCG GGGCTGA
|
|---|
| Protein sequence | MSRFLSPEEI AELQPSELLP NETPIPTQIV SSDEFYPTPQ TGPQKQVEAR LLAMADELGS
HQGMNRRQFF RSAAGMAAAF VAMNEVYGLV FGASRAEAAS PELANERAGT YRDQFIMDMH
THFLRDDTRL ERFVRMREAV GRAGWNKPLG EREQTLEDLK YENYLKEIYL DSDTKIALIS
SSPSDEAQDW FLTNEQMAEA REKVNAHAGS KRLYTHAIFT PGQPGWLEQL DAALELKPDS
VKGYTVGDNT HKATSRYPWR MDDEQVAYKG YEKMLKAGVK NVCVHKGLFP PSMDERYPHL
RDYADVRDVA QAAKDWPDLN FIIYHSGYRH VGGDPAVALQ EFETTGRIDW VSDLADIPEK
YGVSNVYGDL GQVFATTLVA QPRVCAAIMG ILVRGLGADH VCWGTDAIWT GSPQWQIEGL
RRLEIPEDMR RRHGFAELGA ADGAVKNAIF GGNNARLYGL SEQARRAFAG DRMAAIKADY
ERNGAERSNL RYGYVARG
|
|---|
| |