Gene Tgr7_1108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1108 
Symbol 
ID7315817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp1192912 
End bp1193298 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content65% 
IMG OID643615995 
Productprotein of unknown function DUF302 
Protein accessionYP_002513181 
Protein GI220934282 
COG category[S] Function unknown 
COG ID[COG3439] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.171345 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGGAT TCAGCAAACA GGTTTCATGC GGTTTCGATG ACGCGGTGGC CCAGGTGACC 
GCCGCGCTTA AAGATGAAGG CTTCGGCGTG CTCACCGAGA TCGACGTGAA GGCGGTGATG
AAGGCCAAGC TGGACCTGGA CAAGCGTCCC TACAAAATCC TCGGCGCCTG CAACCCGGTG
CTGGCCAACA AGGCGCTCAC CGCCGAGCCG GACATCGGCC TGCTGCTGCC CTGCAACGTG
GTGGTGCGCG AGGAGGAGAA CGGCGCCATC ACCGTCGCCT TCATGGACCC CCAGGCGGTG
CTGGACCTGG TACAGCAGCC GGGCATCCAC GACCTGGCCG GCGAGGTGAA GGCGCGACTG
GAGCGGGTGC GCGACGCCCT CAAGTGA
 
Protein sequence
MYGFSKQVSC GFDDAVAQVT AALKDEGFGV LTEIDVKAVM KAKLDLDKRP YKILGACNPV 
LANKALTAEP DIGLLLPCNV VVREEENGAI TVAFMDPQAV LDLVQQPGIH DLAGEVKARL
ERVRDALK