Gene Tgr7_1101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1101 
Symbol 
ID7315810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp1186333 
End bp1187118 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content69% 
IMG OID643615988 
Producthypothetical protein 
Protein accessionYP_002513174 
Protein GI220934275 
COG category[L] Replication, recombination and repair 
COG ID[COG3298] Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCGA TCATGGTGTT CGACATCGAG ACCGTCCCCG ACGTGGAGGG CGCCCGGCGC 
ATCCACGGCT TCGAGGGTCT CTCCGACGAG GACACGGCCA AGGCCATGGC CCAGCTGCGG
GTGCAGAAGA CCGGCAGCGA GTTCCTGGCC CACCACCTGC ACCGCATCGT GGCCATCTCC
GTGGTCCTGG CTACCCGGGA CCGCCTGGCG GTCTGGTCCC TGGGCGACGA GGACGCCAGC
GAAAAGGAGC TGCTGACCCG CTTCTTCGAG GGCGTGGAGC GCTACACCCC GACACTGGTC
ACCTGGAACG GCGGCGGCTT CGACCTGCCG GTGATCCACT ACCGCACCCT GCTGCACGGC
ATCAGCGCCG CCCGCTACTG GGAGATGGGC GACGACGACC GGGAGTTTCG CTACAACAAC
TACCTGTCCC GCTTCCACTG GCGCCACGTG GACCTGATGG ACGTGCTGGC CGGCTTCCAG
GCCCGGGCCA ACGCCCCCCT GGACGAGGTG GCCAGCCTGC TGGGCTTCCC AGGCAAGATG
GGCATGAGCG GCGCCAAGGT CTGGGACGCT TACCTGGCCG GCGACATCCG CGGCATCCGC
AACTACTGCG AGACCGACGT GCTCAACACC TACCTGGTCT ACCTGCGCTT CGAGCGCATG
CGCGGCCGGC TCACGGAGCA GGCCCTGGAA GCGGAACTGG AGCGGGTGCG GCACATGCTG
GCGGAATCCC CCGAGGCGCA CCTGGGCGCC TTCCTGGACG CCTGGCAGGC GGGGAAGAAC
GCCTGA
 
Protein sequence
MTPIMVFDIE TVPDVEGARR IHGFEGLSDE DTAKAMAQLR VQKTGSEFLA HHLHRIVAIS 
VVLATRDRLA VWSLGDEDAS EKELLTRFFE GVERYTPTLV TWNGGGFDLP VIHYRTLLHG
ISAARYWEMG DDDREFRYNN YLSRFHWRHV DLMDVLAGFQ ARANAPLDEV ASLLGFPGKM
GMSGAKVWDA YLAGDIRGIR NYCETDVLNT YLVYLRFERM RGRLTEQALE AELERVRHML
AESPEAHLGA FLDAWQAGKN A