| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1099 |
|---|
| Symbol | |
|---|
| ID | 7315808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 1183441 |
|---|
| End bp | 1185372 |
|---|
| Gene Length | 1932 bp |
|---|
| Protein Length | 643 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643615986 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_002513172 |
|---|
| Protein GI | 220934273 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCCG CTAACCAGCT GACTCGCATA CTCATATCGA TACTGGGCGC AGCCCTGACA
TCCCTGCCCG TGGCCCAGGC CCAGCAGGAC CCCTTGCCCA CGGAACACGA TTTCTTCATG
GACCTGCCGG TGGTGCTGAC CGCCACCCGC CTGCAGCAAC CGGTGGCCGA GGCCCCCGCC
GCCGTCACCG TCATCGACCG GGAACTGATC GAGGCCTCCG GCGCCCGGGA ACTGGTGGAC
ATCCTGCGCC TGGTGCCGGG CATGATCGTG GCCCGGCACA GCAACCACGA GCCCGTGGTG
ACCTACGGCG GACTCCCGGA GCGTCATGCA AGGCGCATGC AGGTCCTGGT GGACGGCCGT
TCCGTGTACC AGCCCTTCGA CGGCGGCGTG TTCTGGACCG ACCTGGGACT GGCCATCGAG
GACATCGAGC GCATCGAGGT GATCCGCGGT CCGAACTCCG CCGCCTATGG CCCGAACTCC
TTCCTGGGCG TCATCAATAT CATCACCCGC CACCCTGCCG AGGTCCGGGG CCACCATGTG
ACCAGCCGCC TCGGCACCAA CGGCGTTCGC GACCTGGTGG CGCGGCAGAG TGGCGGCCGG
GACAACCTCG ACTACCGACT GACCCTGTCC ACCCAGGAAG ACAACGGATT CCCCGACACG
AACAGCGATA AGCGCGCCCA GTTCGCCAAC CTGCGCATGG ATTACCGCAT GACCCAGGAA
CACAGCCTGA CCACCCAGGC AGGGTTCGGA CAGTCACGCA AGGCGCGGGG CTTCATGGAT
AACCCTGTTG ATCCCGAGCG TCGCTTCACG ACTGACAGCG CGTTCGTCCA GATGCGACTG
GACAGGGACA CCGGGATCGG AGAAAGCTGG AGCCTGCAGT ACTACTACCA GCAGTTCGCC
ACGGTCGACG AGTTCAATAC CGGGGACTTT CTCTTCCAGG GAGTCATCCC GCTCGTCGAC
ATGGCGCTGG ACTTCAATCA CCGGACGGAT CGACACGACC TGGAGTTTGA ACATCGCACG
CTGCTCTCAC CCGGGAGCCG CCTGATCTGG GGCACAGGGC TTCGCCACGA CAAGGTCACC
TCGTCCACCT ATTTCAGCGA ACGCAGCCCG GTCAGTGATG ACATGCAACG GGTATTCGGG
AATCTCGAAT TCGACCTCAG CGCCATCACG ACACTGAATC TGGGAGCCAG CTATGAACGC
AGCCGCCTGT TCGGCGACCA GTTCTCGCCC CGGCTTGCGC TGAATGCACA TCCAAACCCG
ACGCACAGTT TCCGCTTCAT TGCCTCCAGG GCGACACGCA CACCGTCACC CACGGAGGAA
CTGGCGCGTC AGATTTATTA CCCAATGGAC ATCTTTGGAA ACACCTACGA GGTCATCATT
CTCGATGCCG ACGGCGGCCT GAAGCCCGAA CGACTGGAGT ATTACGAAAT AGGCCACCAC
TATTCACTCA ACGGTAGTCG CGCGGCCATC GACACCAAGG TCTTCAGCAA CAGGATCACG
CGATTCATCG ATGCCATCAA CGCTTCACGC TCCTTTGCCG ACAGGGGTGG CGTCGCCTAC
CAGGGCATCG AGATGCAGCT CGGGTACTGG CTCTCGGACC GAACCCGCCT GCACGGTGGC
CTGACTTATC ACTTCAACCG GGATGACATG AGCGAACAGG GCGACGGCCG TTACGGCGAA
GCAGTCCCGC GTCGCATTCT CAACGCCGCC ATCACCTCCC GGGTCACCGA TCAGCTGCGC
CTCTCGAGTA CCTACTATCA TTATTCCGAG GTGAACTGGA TCGACGGCGC GCCTACGGAT
GCCTACGATG GCTTCCTGGA TGTCTCCGCC GAGTGGACCC TGAATAGGCA TGCACGTCTT
GGTGTCACGG TACAGGACCT GCTGGCACGG GGCTATGACG GGAGAACACC GGCCAATGCC
GATATCTACT AG
|
|---|
| Protein sequence | MKPANQLTRI LISILGAALT SLPVAQAQQD PLPTEHDFFM DLPVVLTATR LQQPVAEAPA
AVTVIDRELI EASGARELVD ILRLVPGMIV ARHSNHEPVV TYGGLPERHA RRMQVLVDGR
SVYQPFDGGV FWTDLGLAIE DIERIEVIRG PNSAAYGPNS FLGVINIITR HPAEVRGHHV
TSRLGTNGVR DLVARQSGGR DNLDYRLTLS TQEDNGFPDT NSDKRAQFAN LRMDYRMTQE
HSLTTQAGFG QSRKARGFMD NPVDPERRFT TDSAFVQMRL DRDTGIGESW SLQYYYQQFA
TVDEFNTGDF LFQGVIPLVD MALDFNHRTD RHDLEFEHRT LLSPGSRLIW GTGLRHDKVT
SSTYFSERSP VSDDMQRVFG NLEFDLSAIT TLNLGASYER SRLFGDQFSP RLALNAHPNP
THSFRFIASR ATRTPSPTEE LARQIYYPMD IFGNTYEVII LDADGGLKPE RLEYYEIGHH
YSLNGSRAAI DTKVFSNRIT RFIDAINASR SFADRGGVAY QGIEMQLGYW LSDRTRLHGG
LTYHFNRDDM SEQGDGRYGE AVPRRILNAA ITSRVTDQLR LSSTYYHYSE VNWIDGAPTD
AYDGFLDVSA EWTLNRHARL GVTVQDLLAR GYDGRTPANA DIY
|
|---|
| |