Gene Tgr7_1092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1092 
Symbol 
ID7315801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp1175628 
End bp1176314 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content68% 
IMG OID643615979 
ProductRibonuclease III 
Protein accessionYP_002513165 
Protein GI220934266 
COG category[K] Transcription 
COG ID[COG0571] dsRNA-specific ribonuclease 
TIGRFAM ID[TIGR02191] ribonuclease III, bacterial 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.268595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGGA TTCCGCTTCA CGATCTCCTG CCCGAGGGGC TGCACGATTC CGAACTGCTC 
ACCGAGGCGC TCACACACCG CAGCGCCGGG AGCCCCAACA ACGAGCGCCT GGAATACCTG 
GGTGACGCGG TGCTGGGCAT GGTGATGGCG GAGCATCTGT TCAAGGCCCA CCCGGAGGCC 
AGCGAGGGTG ACCTCAGCCG GCTTCGCGCC ACCCTGGTGA ACAAGGACAG CCTGGCCGTG 
ATCGGCAAGG CCCAGGGCCT TGGCGGGCAC ATCAACCTGG GCCAGGGGGA GCTGAAAAGC 
GGCGGCGCCC GGCGCAACTC CATCCTGGCC GATGCGGTGG AGGCGGTGAT CGGCGCGGTC 
TACCTGGACA GCGGTTTCGA TGCCGCGCGG CGTTTCGTGC TGGCGCTCTA CGCTGATCGG 
CTGGAGAGTC TGCCCGCGCT GGACGCCCTC AAGGATCCCA AGACCCGGCT CCAGGAATGG 
CTGCAGGGCC GCAGCCGGGA ACTGCCCGTC TACGAGGTCA CCTCCGTGAC CGGCAAGGCC 
CACGAGCAGC GTTTCCGCGC CCTGTGCCGT GTGGGGGACC AAGAGTACCC GGGTGAAGGC 
ACCAGCCGTC GGCGCGCCGA GCAGGCCGCG GCGGAATGCG CATTGAAGGC GCTGGAGACC 
AGTGGCAAGA GGCAAGAGGC AAGTTGA
 
Protein sequence
MSRIPLHDLL PEGLHDSELL TEALTHRSAG SPNNERLEYL GDAVLGMVMA EHLFKAHPEA 
SEGDLSRLRA TLVNKDSLAV IGKAQGLGGH INLGQGELKS GGARRNSILA DAVEAVIGAV 
YLDSGFDAAR RFVLALYADR LESLPALDAL KDPKTRLQEW LQGRSRELPV YEVTSVTGKA 
HEQRFRALCR VGDQEYPGEG TSRRRAEQAA AECALKALET SGKRQEAS