Gene Tgr7_1087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1087 
Symbol 
ID7315796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp1170869 
End bp1172302 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content67% 
IMG OID643615974 
Productprotease Do 
Protein accessionYP_002513160 
Protein GI220934261 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.386741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGTTT TCTCGCGTAG TACCCTGCCT TTCGCCCTGC TGTTCCTCAC CCTGGTGTTT 
TCCGCGGCTG CCCAAGGGCG CGCCGCGCTG CCGGATTTCG TCCCCCTGGT GGAGGACAAC
AGCCCGGCGG TGGTCAACAT CAGCACCACC CGCAATATCG CCCGCGGCGG CCGTGAACCC
CCCCAGTTGC GCATCCCCGA TATGCCCGAT GACGGCGTGT TGGGTGACCT GCTACGGCGT
TTCTTTGGCG AGGGCGGCCA GATGCCCGAG CAGTTCGACA CCAGTTCCCT GGGCTCGGGC
TTCATCATCT CGCGCGACGG CTACGTGGTG ACCAATCATC ACGTCATCGA GGATGCCGAC
GAGATCATCG TGCGCCTGAG CGACCGGCGC AGCTTCCCCG CCACCGTGGT CGGTTCCGAT
CCCAAGAGCG ACGTGGCCCT GCTCAAGATC GAGGCCAGCG ACCTGCCGAC CCTCAAGCTG
GGTAACTCCG AGCAGCTCAA GGTGGGCGAG TGGGTGCTGG CCATCGGCTC TCCCTTCGGC
TTCGACCATT CCGTGACCGC GGGTATCGTA AGCGCCAAGG GGCGCAGCCT GCCCACGGAG
AACTACGTGC CCTTCATCCA GACCGACGTG GCCATCAACC CGGGCAACTC CGGCGGGCCG
CTGTTCAACA TGAAGGGCGA GGTGGTCGGC ATCAATTCCC AGATCTACAG CCGCACCGGC
GGTTTCATGG GCCTGTCCTT CGCCATCCCC ATCGAGATGG CCATGGAAGT GGTCGAGCAG
CTCAAGACCC AGGGCTACGT GAGCCGGGGC TGGCTGGGTG TGCTGATCCA GGAGGTCACC
CGGGAACTGG CCGACTCCTT CGGCATGAGC CGTCCCACCG GAGCCCTGGT GGCCCGGGTG
CTGCCCGACA GCCCTGCGGA GAAGGCCGGT GTGCGGGTGG GCGACGTGAT CCTGACCTTC
AACGGCGAGG AGGTCACCCG CTCCAGCGCC CTGCCGCCCC TGGTGGGGCG TGCCCCGGTG
GGCAAGGACG CCCGGGTCGA GATCCTGCGC GACGGTCGCA AGCAGACCCT GCGGATACGC
ATCGCGGAAC TGCCGCCGGA CGACGAACTG GCCAGCCGCG CGCCGGCCGA ATCAGTGGCC
CCTTCGGCAG CTGAAAATCG CTTCGGCATG ACCCTGGAGC CGGTGCCCGC CGAGTTGCGC
GAGGCCCTGG ACCTGGAGCA GGGCGGTGTC CTGGTGGCCG GGGTCGGCGA GGGCGCGGCA
CGGGATGCGC GCATCCAGCG CGGCGACGTG CTGGTGATGA TCAACAACCA GCGCATCGAA
TCTCCCGCGC ATTTCGCCGA GCTGGCGGGT AAACTCACCC CCGGCAGCAG GGTCCCCGTG
CTGGTGCAGC GTCCCCAGGG TCCGGTCTTT CTGGCACTGA AGGTGCCGGA TTGA
 
Protein sequence
MMVFSRSTLP FALLFLTLVF SAAAQGRAAL PDFVPLVEDN SPAVVNISTT RNIARGGREP 
PQLRIPDMPD DGVLGDLLRR FFGEGGQMPE QFDTSSLGSG FIISRDGYVV TNHHVIEDAD
EIIVRLSDRR SFPATVVGSD PKSDVALLKI EASDLPTLKL GNSEQLKVGE WVLAIGSPFG
FDHSVTAGIV SAKGRSLPTE NYVPFIQTDV AINPGNSGGP LFNMKGEVVG INSQIYSRTG
GFMGLSFAIP IEMAMEVVEQ LKTQGYVSRG WLGVLIQEVT RELADSFGMS RPTGALVARV
LPDSPAEKAG VRVGDVILTF NGEEVTRSSA LPPLVGRAPV GKDARVEILR DGRKQTLRIR
IAELPPDDEL ASRAPAESVA PSAAENRFGM TLEPVPAELR EALDLEQGGV LVAGVGEGAA
RDARIQRGDV LVMINNQRIE SPAHFAELAG KLTPGSRVPV LVQRPQGPVF LALKVPD