| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1087 |
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| Symbol | |
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| ID | 7315796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1170869 |
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| End bp | 1172302 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643615974 |
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| Product | protease Do |
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| Protein accession | YP_002513160 |
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| Protein GI | 220934261 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.386741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGTTT TCTCGCGTAG TACCCTGCCT TTCGCCCTGC TGTTCCTCAC CCTGGTGTTT
TCCGCGGCTG CCCAAGGGCG CGCCGCGCTG CCGGATTTCG TCCCCCTGGT GGAGGACAAC
AGCCCGGCGG TGGTCAACAT CAGCACCACC CGCAATATCG CCCGCGGCGG CCGTGAACCC
CCCCAGTTGC GCATCCCCGA TATGCCCGAT GACGGCGTGT TGGGTGACCT GCTACGGCGT
TTCTTTGGCG AGGGCGGCCA GATGCCCGAG CAGTTCGACA CCAGTTCCCT GGGCTCGGGC
TTCATCATCT CGCGCGACGG CTACGTGGTG ACCAATCATC ACGTCATCGA GGATGCCGAC
GAGATCATCG TGCGCCTGAG CGACCGGCGC AGCTTCCCCG CCACCGTGGT CGGTTCCGAT
CCCAAGAGCG ACGTGGCCCT GCTCAAGATC GAGGCCAGCG ACCTGCCGAC CCTCAAGCTG
GGTAACTCCG AGCAGCTCAA GGTGGGCGAG TGGGTGCTGG CCATCGGCTC TCCCTTCGGC
TTCGACCATT CCGTGACCGC GGGTATCGTA AGCGCCAAGG GGCGCAGCCT GCCCACGGAG
AACTACGTGC CCTTCATCCA GACCGACGTG GCCATCAACC CGGGCAACTC CGGCGGGCCG
CTGTTCAACA TGAAGGGCGA GGTGGTCGGC ATCAATTCCC AGATCTACAG CCGCACCGGC
GGTTTCATGG GCCTGTCCTT CGCCATCCCC ATCGAGATGG CCATGGAAGT GGTCGAGCAG
CTCAAGACCC AGGGCTACGT GAGCCGGGGC TGGCTGGGTG TGCTGATCCA GGAGGTCACC
CGGGAACTGG CCGACTCCTT CGGCATGAGC CGTCCCACCG GAGCCCTGGT GGCCCGGGTG
CTGCCCGACA GCCCTGCGGA GAAGGCCGGT GTGCGGGTGG GCGACGTGAT CCTGACCTTC
AACGGCGAGG AGGTCACCCG CTCCAGCGCC CTGCCGCCCC TGGTGGGGCG TGCCCCGGTG
GGCAAGGACG CCCGGGTCGA GATCCTGCGC GACGGTCGCA AGCAGACCCT GCGGATACGC
ATCGCGGAAC TGCCGCCGGA CGACGAACTG GCCAGCCGCG CGCCGGCCGA ATCAGTGGCC
CCTTCGGCAG CTGAAAATCG CTTCGGCATG ACCCTGGAGC CGGTGCCCGC CGAGTTGCGC
GAGGCCCTGG ACCTGGAGCA GGGCGGTGTC CTGGTGGCCG GGGTCGGCGA GGGCGCGGCA
CGGGATGCGC GCATCCAGCG CGGCGACGTG CTGGTGATGA TCAACAACCA GCGCATCGAA
TCTCCCGCGC ATTTCGCCGA GCTGGCGGGT AAACTCACCC CCGGCAGCAG GGTCCCCGTG
CTGGTGCAGC GTCCCCAGGG TCCGGTCTTT CTGGCACTGA AGGTGCCGGA TTGA
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| Protein sequence | MMVFSRSTLP FALLFLTLVF SAAAQGRAAL PDFVPLVEDN SPAVVNISTT RNIARGGREP
PQLRIPDMPD DGVLGDLLRR FFGEGGQMPE QFDTSSLGSG FIISRDGYVV TNHHVIEDAD
EIIVRLSDRR SFPATVVGSD PKSDVALLKI EASDLPTLKL GNSEQLKVGE WVLAIGSPFG
FDHSVTAGIV SAKGRSLPTE NYVPFIQTDV AINPGNSGGP LFNMKGEVVG INSQIYSRTG
GFMGLSFAIP IEMAMEVVEQ LKTQGYVSRG WLGVLIQEVT RELADSFGMS RPTGALVARV
LPDSPAEKAG VRVGDVILTF NGEEVTRSSA LPPLVGRAPV GKDARVEILR DGRKQTLRIR
IAELPPDDEL ASRAPAESVA PSAAENRFGM TLEPVPAELR EALDLEQGGV LVAGVGEGAA
RDARIQRGDV LVMINNQRIE SPAHFAELAG KLTPGSRVPV LVQRPQGPVF LALKVPD
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