Gene Tgr7_1084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1084 
Symbol 
ID7315793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp1168786 
End bp1169376 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content68% 
IMG OID643615971 
Productanti sigma-E protein, RseA 
Protein accessionYP_002513157 
Protein GI220934258 
COG category[T] Signal transduction mechanisms 
COG ID[COG3073] Negative regulator of sigma E activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCCA CGAAGAATGA ACGCCTGTCC ACCCTGGTGG ACGACGAGGC TGACAGCTTT 
GAGGTACGAC GCCTGGTGGA TGAGCTTGGC AAGCATCCCG AGGACCTGGC CCAGTGGGGC 
CGTTACCACC TGATCGGCGA CGCCATCCGC GGCGGTCTGA ATCGCTCGGC CCCGCCAGAC 
TTCGCCAGTC GGGTGAGTGC CCTGATCGAG CAGGAGCCCG CCCTGACGGG TGTGCCCCAG 
CAGGTCGGCC GAGGCCTGCT CAAGCCGGTC GCCGGCGTGG CCATGGCCGC GTCCGTGGCC 
GTGGCCGTGC TGGTGGGTGT CATGAACGTG GGGGGTACCC CGGAGACCAT GCCCGCTCCC 
GCTCTGGCCG AGCGCCCGGT GTCAGCCCCG CTGGCCATGC AGGTGGCTGA GGGTGAACGA 
CAGCTGGCCT CCGGCAACGC CCAACGGGTC CGCGAGGCAT CCGGTTTCAG CCGTCTCGAG 
ACCCCCGATG CCCGACTCAA CAGTTTCATC GTCAATCACG CCGAACACGC CGGTGGTCAG 
GGCCTGATGC CCTACGTGCG GGTGGTCGGC TTCGAAACCC CCGGGGAATA A
 
Protein sequence
MTATKNERLS TLVDDEADSF EVRRLVDELG KHPEDLAQWG RYHLIGDAIR GGLNRSAPPD 
FASRVSALIE QEPALTGVPQ QVGRGLLKPV AGVAMAASVA VAVLVGVMNV GGTPETMPAP 
ALAERPVSAP LAMQVAEGER QLASGNAQRV REASGFSRLE TPDARLNSFI VNHAEHAGGQ 
GLMPYVRVVG FETPGE