| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1083 |
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| Symbol | |
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| ID | 7315792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1168161 |
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| End bp | 1168736 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643615970 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_002513156 |
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| Protein GI | 220934257 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02939] RNA polymerase sigma factor RpoE |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGCAAGA AGGTCACCGA CGAGGAGCTG GTCAAGCGTG TTCAGGCCGG AGACAAGAAA
GCTTTTGACG CCCTTGTGCT CAAGTACCAG CACAAGATCG TCAATCTTGT CTCCCGCTAT
GTGCACGACC CCTCTGCCGC CCTGGATGTC TCCCAGGAGG CCTTCATCAA GGCCTACCGG
GGCCTGGCCA ATTTCCGTGG CGACAGCGCC TTCTACACCT GGCTCTACCG GATCGCCATC
AACACGGCAA AGAATTACCT CGTCTCCCAG AACCGGCGTA CCCCCGACTA CGAGGTGGAT
GCCCAGGACG CCGAGCAGAT GGGCGGTGAA TCCGCCCTCA AGGAATATGC AACCCCCGAG
GGTGAATTGC TGTCACAGGA GATACAGGCC GCGGTGCAGC GCACCATCGA GACCCTGCCC
GAGGACCTGA AGACCGCCAT CACCCTGCGT GAGCTGGAAG GCATGAGTTA CGAAGAGATA
GCGCAGACCA TGGGATGCCC GATCGGCACC GTGCGCTCAC GCATCTTCCG GGCCCGGGAG
GCCATCGACC GGACCCTGCG ACCCCTGCTG GAGTGA
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| Protein sequence | MGKKVTDEEL VKRVQAGDKK AFDALVLKYQ HKIVNLVSRY VHDPSAALDV SQEAFIKAYR
GLANFRGDSA FYTWLYRIAI NTAKNYLVSQ NRRTPDYEVD AQDAEQMGGE SALKEYATPE
GELLSQEIQA AVQRTIETLP EDLKTAITLR ELEGMSYEEI AQTMGCPIGT VRSRIFRARE
AIDRTLRPLL E
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