| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1067 |
|---|
| Symbol | |
|---|
| ID | 7316645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 1154200 |
|---|
| End bp | 1154604 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643615954 |
|---|
| Product | PilT protein domain protein |
|---|
| Protein accession | YP_002513141 |
|---|
| Protein GI | 220934242 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTATC TGCTGGATAC CAACATCCTC ATTGCGGCGA TGAAGGGGCA CCCGCAGGTG
CGCGAGCACC TGGAGGTTAC GCCGTTGCAG GAGATCGTGT TGTCTCCGGT GGTGCTTGGC
GAACTCGAAC TGGGTGTGGC CAAGAGCCGG TATCGGGACA AGAACGCGGC CCGTCTTGCC
GAATTGGTCC GAGGCATTGC GCTGCAACCC ATCGATGCCG AGGTGGCGCG CCACTACGCC
CGCATACGGG CCGCACTGGA GCAGGCGGGT ACGCCCATTG GCGCCAATGA CTACTGGATC
ACGGCTCAGG CCCTGGCCCA GGAACTGATC CTGGTGAGTG ACAATGTCCG GGAGTTTTCC
CGCGTGGGTG GACTGAAACT GCAAAACTGG ATGGCGGCGC CATGA
|
|---|
| Protein sequence | MPYLLDTNIL IAAMKGHPQV REHLEVTPLQ EIVLSPVVLG ELELGVAKSR YRDKNAARLA
ELVRGIALQP IDAEVARHYA RIRAALEQAG TPIGANDYWI TAQALAQELI LVSDNVREFS
RVGGLKLQNW MAAP
|
|---|
| |