| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1054 |
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| Symbol | |
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| ID | 7316632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 1143565 |
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| End bp | 1144272 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643615941 |
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| Product | tRNA pseudouridine synthase C |
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| Protein accession | YP_002513128 |
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| Protein GI | 220934229 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGCCC CAGCGCCTTT CACGATCCTC CACCAGGACG ACGACCTGGT GGCCATCAAC
AAGCCGGAGC AGATGCTGGT GCACCGTAGC CCCATCTCCC GGGACGAGGT GTTCGTGCTG
CAGCGTCTGC GCGATCAACT CGGCCAGCGG GTGTACACGG TGCACCGCCT GGACCGCCCC
ACTTCCGGCG TGCTGCTGTT CGGTCTGCAC CCCGCAGCGG CTACCGCCAT GGCGCGACAG
TTCGAGGCCG GCGAGGTACA CAAACGCTAT CTGGCCGTGG TGCGCGGCTA CACCGAGGAA
TCGGGTGAGA TCGATCACCC GCTGGAATCG GAAGACGGCC GCGGCCTGCA GCAGGCCGTG
ACCCGCTACC GGCGCCTGGC CACCGTGGAG CTGGACATCC CGGTGGGGCG CTATCCCGTG
GCCCGCTATT CACTGCTGGA GGTCTGGCCG CGCAGCGGCC GGCGTCACCA GATCCGGCGC
CACTTCAAGC ACATCTTCCA TCCCCTGGCG GGTGATACCA CCTACGGCGA GGGCCGGCAC
AACCGGCTGT TCCGGGAGCA CTTCGGCGTG GAGCGCCTGC TGCTGCACGC CAGCCACCTT
TCCCTGCGAC ACCCGTCAAC GGGTGAGGCA CTGAACCTGC ACGCCCCGCT GCCGGAGGCC
TTCAGCGTGC TGTTGCAGCG GCTGGGGTGG ACGGCGTTTG CGCATTGA
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| Protein sequence | MHAPAPFTIL HQDDDLVAIN KPEQMLVHRS PISRDEVFVL QRLRDQLGQR VYTVHRLDRP
TSGVLLFGLH PAAATAMARQ FEAGEVHKRY LAVVRGYTEE SGEIDHPLES EDGRGLQQAV
TRYRRLATVE LDIPVGRYPV ARYSLLEVWP RSGRRHQIRR HFKHIFHPLA GDTTYGEGRH
NRLFREHFGV ERLLLHASHL SLRHPSTGEA LNLHAPLPEA FSVLLQRLGW TAFAH
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