| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1046 |
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| Symbol | |
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| ID | 7316623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 1135277 |
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| End bp | 1136956 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643615932 |
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| Product | putative diguanylate cyclase |
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| Protein accession | YP_002513120 |
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| Protein GI | 220934221 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.25674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCAG TGCACCCATC GCACGGACGG TCAGACGCCT TGCCACACAC ACGCGCCACA
CCCTATCTCG CCGCCGCGTT CACCCTGGTC ATCATCCTGA TGCTGGTGGT GGCCGTCCTG
GGCTGGATCC GGGTGGAGGC GCTACATACC CAGATGGACC ACCTCACCCA GCGGCATGCG
GAAAAGCTGG ATCGCATGCA CCGGATGCGC AGCATCGTGC GGGAACGCTT CATCCGCATG
AGCCTGATCG TGAGCACCGA TGACCCGTTC CTGCGCGATG AATACGCCCA GGAGTTCGGC
GCCCTGGCAC GGGAATTCAT GGCGGCCCGG GCGGACGTGG AACGCCTGAC CACGGAGCCC
ACGGAAGTCG CCCTGCTGGA GGAGCTGCGC CGCCTCAACG CCCTGGGCAC ACCCATCATG
GTCAGCGTCG TGGAGGCAGG TCTGGAGAAT CAGCAGGAAC TCGCCCTGTC CGTGCTGCTC
GATCAATCCC TGCCCAAGCA GGAACGGGTC ATGGCGCACA TGGACCTGAT CCTCGACACC
TTCCAGCAGG CCTACCAACA GGCGCTGGAT GAGCTGGCAC AGACCCGGGA GCAGACCCGG
CGCACCTTCC TGCTCACGGC CATGGTGGCC ACGCTGCTCA TCTTCATCAT CGCCCTGAAC
GTGACGGGCC GCATCCAGCG CCAGCAGGAG GATCTGTTAT CCGAGGTCGA AGCACGCCGC
CGGACCGAGG CCCTGCTGCG CGAGACCCAG GAGGGCCTGG AGCGCAGCGT GGCGGAACGC
ACCGCCGCCC TGCGGGAGAC CACCGCACGG CTGGAGGATG CCCAGCGCAT CGCGGGGGTT
GGGCACTGGG ACTGGGATAT CGAACGGGGC CGCCTGCACT GGTCGGACAG CATCTACCAA
CTGTTCGGTC TGCCCCGACA GGGCGAGCTT GCGTCCTACG AACATTTTAT GGCGGCTGTG
CACCCGGATG ACCGGCAGAT ACTGCAACAG GCGGTGGACA GGGCGCTGGC CGGCGACGCG
CCCTACCAGG TGGATCATCG CATCGTCAGG CCCGATGGCG AGATCCGGCA CGTGCGCGAG
GAAGCCGAGG TGACCCGTGA CAGTACCGGC CAGCCTGTCC GCATGCTGGG CACAGTGCGG
GACATCACCG CAGACATCGC CATCCAGCAA CAACTCTGGC ACCTGGCTCA CCACGACCCC
CTGTCTGCCC TGCCCAACCG AAACCTGTTT CGGGCCCTCC TGGATCAGGC CCTGGAGCGG
ACTAGCCGCT CGGGCAAGAA ACTGGCGGTG ATGCTCTGCG ACCTGGACGG CTTCAAGGCC
ATCAACGACC GGCATGGTCA CGCCACCGGC GACCAGGTGA TCATACACAC GGCACGTCGA
CTCAAGGGTG CCATCCGGCG CAGTGATGTG GCCGCACGCC TGGCCGGTGA CGAGTTCGTG
GTGCTCCTTG AGGATCTCAA CGATGCCGAG GAGGCGGTCG CCGTCGCCGG CAAGCTGCTT
AAGGACATCA ACGCACCCAT CGCGCTGGCT GCCGCAGAAG TCTCGGTGGG CATCAGCATC
GGCATCGCCG TGTCCCCCGA GCATGGCGAG ACCGCAGAGA CACTGATGGC CGGCGCGGAT
GCCGCCATGT ACGCCGCCAA GGCCGCCGGC AAGGGCAGTA TCCGGCTGGC GGGAGACTGA
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| Protein sequence | MTAVHPSHGR SDALPHTRAT PYLAAAFTLV IILMLVVAVL GWIRVEALHT QMDHLTQRHA
EKLDRMHRMR SIVRERFIRM SLIVSTDDPF LRDEYAQEFG ALAREFMAAR ADVERLTTEP
TEVALLEELR RLNALGTPIM VSVVEAGLEN QQELALSVLL DQSLPKQERV MAHMDLILDT
FQQAYQQALD ELAQTREQTR RTFLLTAMVA TLLIFIIALN VTGRIQRQQE DLLSEVEARR
RTEALLRETQ EGLERSVAER TAALRETTAR LEDAQRIAGV GHWDWDIERG RLHWSDSIYQ
LFGLPRQGEL ASYEHFMAAV HPDDRQILQQ AVDRALAGDA PYQVDHRIVR PDGEIRHVRE
EAEVTRDSTG QPVRMLGTVR DITADIAIQQ QLWHLAHHDP LSALPNRNLF RALLDQALER
TSRSGKKLAV MLCDLDGFKA INDRHGHATG DQVIIHTARR LKGAIRRSDV AARLAGDEFV
VLLEDLNDAE EAVAVAGKLL KDINAPIALA AAEVSVGISI GIAVSPEHGE TAETLMAGAD
AAMYAAKAAG KGSIRLAGD
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