| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1040 |
|---|
| Symbol | |
|---|
| ID | 7316617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 1129571 |
|---|
| End bp | 1130728 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643615926 |
|---|
| Product | type III restriction enzyme, res subunit |
|---|
| Protein accession | YP_002513114 |
|---|
| Protein GI | 220934215 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.343931 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAAAT TGACGCCGCG AGGCTGGCAA GTCGATGCGC TCGCTAATTG GGAACAAGCT
AACCATCGCG GCATCGTAAG TGTCGTTACG GGCGGCGGTA AGACGGTGTT TGCGCTGTCA
TGCGTCGACC GCATTCGGCC GGTCGCGACA CTCATCGTCG TCCCGACCTC GGCGTTGCTT
GAGCAATGGT GGGAAGAGGC AGCAAGCTAC TTCGATCTTG ATCTTGATGA AATAAACATC
ATCACTGGGA GCCTGCGCTT CCGCCTTGGG GCGATTAACA TCGCAGTGCT CAACACGGCC
GCCAAGTTGC CTGAACGCAT GCAGGAGCAG CATAAGTGCT TCCTAATAGT CGATGAGTGT
CACAAGGCTG CATCTGAACA GTTTCGTTCG GCACTTCAAG TTCCAACCTT CGCGTCTTTG
GGCCTTTCGG CAACTCCTGA ACGGCAATAT GACGACGGCC TGAAGGATGT GCTCGTTCCA
GCACTCGGCG AGATCATCTA CAGCTATGAC TACACAGATG CACTGCGTGA CGGTGTAATC
GTGCCCTTCG AACTGAAGAA CATCGTCTTC GAGTTGGAAG CAGGCAGACA AGCCGAATAT
GACAAGCTCA GCCGAGCCAT AGCGCGCTCC ATCAGCCAGC ATGGCACCGA AGCTGAGGAA
ACGATTGCAC TGTTCCTGAA GCGAGCCCGC GTCTTGAATC TCAGCCTGAA CCGAATTCGC
TTGGCGCTTA AGTTGGTGGC TGCAAATCGC GGCAAGCGTA CCCTGATCTT TCATGAAGAT
ATCGAAGCCT GCGATCTGAT CCACGGCGTG CTATCCGAAA ACGGCGTCAA GAGTGGCGTG
TATCACTCTA AGCTGCCGCT CCGCGCGAAA GCCGCGATGT TGGGACAGTA CCGACGCGGT
GAGATCGATG TGTTGGTAAC GTGTCGTGCG CTCGACGAAG GCTTCAACGT GCCCGAAACT
GAAATCGGTA TCATTGCTGC TAGCACGGCG ACGCGGCGCC AGCGTATCCA ACGACTCGGT
CGGGTCGTGC GACCCGCGAA GGGAAAAAAC CGTGCTTCAA TCTATACGCT CGTTGCGACC
GGTCTAGAAA TTCAGCGCCT CAAAGAGGAA GAGGAGCGCC TTGAGGGCGT AGCAACCGTG
ACGTGGAGCC GGGCATGA
|
|---|
| Protein sequence | MPKLTPRGWQ VDALANWEQA NHRGIVSVVT GGGKTVFALS CVDRIRPVAT LIVVPTSALL
EQWWEEAASY FDLDLDEINI ITGSLRFRLG AINIAVLNTA AKLPERMQEQ HKCFLIVDEC
HKAASEQFRS ALQVPTFASL GLSATPERQY DDGLKDVLVP ALGEIIYSYD YTDALRDGVI
VPFELKNIVF ELEAGRQAEY DKLSRAIARS ISQHGTEAEE TIALFLKRAR VLNLSLNRIR
LALKLVAANR GKRTLIFHED IEACDLIHGV LSENGVKSGV YHSKLPLRAK AAMLGQYRRG
EIDVLVTCRA LDEGFNVPET EIGIIAASTA TRRQRIQRLG RVVRPAKGKN RASIYTLVAT
GLEIQRLKEE EERLEGVATV TWSRA
|
|---|
| |