| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1029 |
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| Symbol | |
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| ID | 7316606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 1116305 |
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| End bp | 1119265 |
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| Gene Length | 2961 bp |
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| Protein Length | 986 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643615915 |
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| Product | two-component sensor CbrA |
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| Protein accession | YP_002513103 |
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| Protein GI | 220934204 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0591] Na+/proline symporter
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.211087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCTG AACTGGGGAT CCTCTATGCG GTAGGCGTGG CGTACCTGGC GTTGCTGTTC
TTCGTGGCAC ATGCCACGGA GAAAGGCTGG CTGCCGGACG CCCTGGTGCG TCACCCCCTG
GTCTACGCCC TGTCCCTGGG CGTCTACGCC ACCTCCTGGA GCTTCTACGG CAGCGTCGGC
TTCGCCGGCG AGCAGGGCTA CAACTTCCTC ACCATCTACC TGGGGGTGAC CCTGGCCTTC
GCCCTGGCCC CGGTGCTGCT GGCGCCCATC CTGCGCCTGG TGCGGGACTA CCAGCTCACC
TCCCTGGCGG ACCTGTTCGC CTTCCGCTAC CGGCACCAGT TCACCGGCGT GCTGGTGACC
CTGTTCATGC TCGCCGGGGT GCTGCCCTAC ATCGCCCTGC AGATCAAGGC GGTGACCGAA
TCCGTGGCGG TGCTCACCCA GGAGGCGCCG CCCCACCTGC TGGCGCTGGG CTTCTGCGCC
ACCCTGAGCC TGTTCGCCAT CCTGTTCGGG GCACGGCACA TCACCCCCCG GGAGAAGCAC
GAGGGCCTGG TGATGGCCAT CGCCTTCGAG TCGGCGGTCA AGCTCATTGC CCTGCTCATG
GTGGGCGTGT TCGCCCTGTT CGGCATCCTG GGCGGCCCCG CGGCCCTGGG GGAATGGCTC
CTGGAACACC CGGAGGCCAT CGAGGCCCTG TACGCGCCGG TGCGTGAGGG GCCGTGGATG
ACCTTCATGC TGCTGGCCTT CGCCGCCGCC TTCCTGCTGC CGCGCCAGTT CCACATGATC
TTCGTGGAGA ACATGGAACC GGGGGCCCTG CGCGTGGCGG CCTGGGCCTT CCCCCTGTTT
CTGTTGCTGC TCAACCTGCC CATCCCCCTG ATCCTGTGGG CCGGTCAGCA GGCCCAGGTG
GGCACGGTAC CGGACTACTA CGTGCTCGGC CTGTCGGTGG AGCACGGCTA CGGCTGGGCA
CTGTTCACCT TCATCGGCGG CGTCTCGGCG GCCAGCGCCA TGATGATCGT CACGACGCTG
GCCCTGGCGG CCATGTGCCT CAATCACCTG ATCCTGCCTG CCCGCTACCA GAACCAGGCC
CTGCCCAGGC AGAATCTCTA CACCTGGCTG CTGTGGGGCC GTCGCATCCT GATCGTGCTC
ATCATCGCCC TGGGCTACGT GTTCTACCGG CTGATGGAAT TCCACCAGAG CCTGGCCCAG
ATCGGCCTCA TTTCCTTCGT CGCCGTGGCC CAGTTCCTGC CCGGCCTCAT GGGCCTGCTG
TTCTGGCCCC GAGCCACCCG CTGGGGCTTC ATCGCCGGGC TCGCCGGCGG CATCACCGTC
TGGGCCCTGG CCCTGATCGT GCCCCTGCTG CAGCAGTCGG GACTCATGCC CGGGCAGCTG
GAACTGCAGA CCTGGTTCCG CGCCACGGAA CAGAACCACT GGGCCTTCGC CACCTTCTGG
TCCCTGGCGC TGAACGCGGT GCTGTTCGTG GCCGGCTCCC TGCTCACCCG GCCCAGCCCC
GAGGAGACCG AGGCGGCACT CGCCTGCCGC CGCGAGCAGA TGGAACCGCC CCGGGGCCAG
CTGGAGGTGC GCAGCGTGCA GCACTTCGAG GAACAGCTGG CCCAGACCGT GGGTCCACAG
ACCGCCGCCC TGGAGGTGAG CCGCGCCCTG GCGGACCTGG GGCTGAAATC CGACGAGACC
CACCCCGGTG AACTGCGTCG CCTGCGTGAA CGCCTGGAGC GCAACCTCTC CGGCCTCATG
GGTCCGCTGC TCTCGCGCAT GATCGTGGAC CACCGCCTGC GGGTGGACCC CCACACCCAG
ATGGCCCTGG CCGACAGCCT GCGTTTCGTG GAGGAGCAGC TGGAGCACTC CAACGTGCGC
CTGCAGGGCC TGGCGGCGGA GCTGGACACC CTGCGCCGCT ACCACCGCCA GGTGCTGCAC
GAACTGCCCC TGGGGGTCTG CTCCCTGACC CCCGGCGGCG AGATCATCAT CTGGAACAGC
GCCATGGGAC TGATCTCCGG CATCCCCAGC CGCGACGCCG TGGGCCAGGA GCTGCGCCTG
CTGGGCGATC CCTGGCACGG CATCCTGCGC GGCTTCCTGC AGGGCGACGA CAAGCACCTC
TACAAGCTGC AGATCAACCT CCAGGGCCGC AGCCGCTGGA TCAACCTGCA CAAGTCGGAG
ATCGAGGCCC CCGGTGCCCT CAATCCCGGC GCCGTGGTGG GCGGCACCGT GATCCTGGTG
GAGGACCTCA CCGAACTGCA CACCCTGGAG AGCGAAGTGG CCCACAACAA CCGCCTGGCC
TCCATCGGCC GGCTGGCCGC CGGGGTGGCC CACGAGATCG GCAATCCGCT CACCGGCATC
GCCTCCCTCG CCCAGAACCT GCACTACGAG CCCGACGAGT CGGAACGTGA GCTCAGCGCC
CAGCAGATCC TCGAGCAGAC CCGGCGCATC AACAACATCG TGCAGAGCCT GATCACCTTC
AGCCACACCG GCGAGGTGCC CAGCACCGCC ATGGGCGCGG TGGACATCAA GATCTGCGTG
GACGAGGCCA TGCAGCTGGT GCAGCTGAGC GACACCGCCC GGGCGCACCT GTTCGAGAAC
CGCCTGCCCC CGGGAATCAC CGTGCGCGGC AGCCACCAGA AGCTGCTGCA GGTGTTCGTC
AACCTGATCA ACAACGCCAT GCAGGCCTCG GGACCCGGCG ACCGTATCCG CATCCAGGGT
GAGGCCACGG CAGGCTTCGC CGAGATCCTG GTGGAGGACG AAGGCACCGG CATCCCCGAG
ACCCTGCTCG ACCGGGTCTT CGAACCCTTC TTCACCACCA AGCCGCCGGG CGAGGGCACC
GGGCTCGGCC TGTCCGTGGT CTACAGCATC ATCCAGGACC ACGGCGGCGC CGTGTACGTG
GACAACCTGC CCCAGGGCGG CGCCTGCTTC ACCCTGCGCC TGCCCCTGAG CACGACGCCC
AGGCTGCGCG CCAGCGGCTG A
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| Protein sequence | MNAELGILYA VGVAYLALLF FVAHATEKGW LPDALVRHPL VYALSLGVYA TSWSFYGSVG
FAGEQGYNFL TIYLGVTLAF ALAPVLLAPI LRLVRDYQLT SLADLFAFRY RHQFTGVLVT
LFMLAGVLPY IALQIKAVTE SVAVLTQEAP PHLLALGFCA TLSLFAILFG ARHITPREKH
EGLVMAIAFE SAVKLIALLM VGVFALFGIL GGPAALGEWL LEHPEAIEAL YAPVREGPWM
TFMLLAFAAA FLLPRQFHMI FVENMEPGAL RVAAWAFPLF LLLLNLPIPL ILWAGQQAQV
GTVPDYYVLG LSVEHGYGWA LFTFIGGVSA ASAMMIVTTL ALAAMCLNHL ILPARYQNQA
LPRQNLYTWL LWGRRILIVL IIALGYVFYR LMEFHQSLAQ IGLISFVAVA QFLPGLMGLL
FWPRATRWGF IAGLAGGITV WALALIVPLL QQSGLMPGQL ELQTWFRATE QNHWAFATFW
SLALNAVLFV AGSLLTRPSP EETEAALACR REQMEPPRGQ LEVRSVQHFE EQLAQTVGPQ
TAALEVSRAL ADLGLKSDET HPGELRRLRE RLERNLSGLM GPLLSRMIVD HRLRVDPHTQ
MALADSLRFV EEQLEHSNVR LQGLAAELDT LRRYHRQVLH ELPLGVCSLT PGGEIIIWNS
AMGLISGIPS RDAVGQELRL LGDPWHGILR GFLQGDDKHL YKLQINLQGR SRWINLHKSE
IEAPGALNPG AVVGGTVILV EDLTELHTLE SEVAHNNRLA SIGRLAAGVA HEIGNPLTGI
ASLAQNLHYE PDESERELSA QQILEQTRRI NNIVQSLITF SHTGEVPSTA MGAVDIKICV
DEAMQLVQLS DTARAHLFEN RLPPGITVRG SHQKLLQVFV NLINNAMQAS GPGDRIRIQG
EATAGFAEIL VEDEGTGIPE TLLDRVFEPF FTTKPPGEGT GLGLSVVYSI IQDHGGAVYV
DNLPQGGACF TLRLPLSTTP RLRASG
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