Gene Tgr7_1022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1022 
Symbol 
ID7316599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp1108904 
End bp1110748 
Gene Length1845 bp 
Protein Length614 aa 
Translation table11 
GC content64% 
IMG OID643615908 
ProductSSF family Na(+)/solute symporter 
Protein accessionYP_002513096 
Protein GI220934197 
COG category[R] General function prediction only 
COG ID[COG4147] Predicted symporter 
TIGRFAM ID[TIGR00813] transporter, SSS family
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.12655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCATGC AATGGGAAGG TAAATCCTTC ATTGAAAACC TGCCGAAGAT CTACGGTGTG 
TACACCGGTG GATTCCTGGC ATTCTTTTTC CTGATGGCCT TTTTTGAACA GATGGGCATG
GGCGCGGACA CCATCGGCAT CCTGTTCGTG GCGTTCACCA TCGGTATCTA TGCGTTCATC
GGTATCCTGT CGAGAACCAT GGCGGTGGAG GCCTACTACG TGGCCGGACG CAGCGTGCCT
CCGGTGTTCA ACGGCATGGC CACCGCGGCG GACTGGATGT CCGGTGCGTC CTTCGTGGCC
ATGGCGGGCG GCATCTTCAT GGGCGGCCAT GGCTACATGG CGTTCGTGGT GGGCTGGACC
GGCGGCTACA TCCTGGTGGC CACGCTGATG GCGCCGTACC TGCGCAAGTT CGGCTGCTAC
ACGGTGCCGG ACTTCATCGG TACCCGCTAC GGCGGCAAGG TGACCCGCTT CGCGGCGATC
CTGGTACTGG TGGTGGCTTC CTTCACCTAC GTGACCGCGC AGATCACCGC GACCGGCACC
ATCGCCGCCC GCGCCCTGCA GATCCCGTTC GCCGTGGGTG TGTGGTTCGG TCTGGCAGGT
ATCCTGGTGT GCTCCATGCT GGGTGGCATG CGCGCGGTGA CCTGGACCCA GGTGGCCCAG
TACATCGTGC TGATCATCGC CTACCTGATC CCGATCTTCT GGATGTCCAT GGCCCAGGGC
TTCGGCCCGC TGCCGCAGCT GATGTACGGC CCGGCGGTGG AGCGCATCAT GGACCTGGAG
CCGGTGATCG GTGTGGGTAC CCTGACCGCC CAGGAGTCGA TACGTGGCCT GTCCACGCTG
ACGCAGCTGC ACGCCACGCC GCGTGAAGGC GCCATGGCTG CCTGGCAGTT CGTGACCCTG
GTGGCCTGTA TGATGATCGG TACGGCTTCC CTGCCGCACA TCCTCATGCG CTACTTCACC
ACGCCCTCCG TGCGTGCTGC CCGTAACTCC GTGGCCTGGT CGCTGTTCTT CATCTTCCTG
CTGTACTTCT CGGCCCCTGC TCTGGCCACG TTCAGCAAGC TGTCGATGAT CGACCCGAAC
CTGCCCACGG CCATCATCGG TCAGCCCATC GAGGCTGTGC TGGCTCTGGA CTGGATCCAG
AAGTGGAGCG CCATCGGCCT GCTGGCTGTT GTCGACAGTA ATGGCGACGG CATCCTGCAG
ATCAACGAGT TCTACCTGAA CCCCGACATC ATCGTGCTGG CCACGCCTGA AATGGCCGGT
CTGCCCTACG TGATCTCGGG TCTGGTAGCC GCGGGTGGTA TGGCTGCCGC CATGTCCACC
GCCGACGGTC TGCTGCTGGC CATGGCCAAC GCCCTGTCCC ACGATCTGTA CTACAAGATC
ATCGACCCGA AGGCGGAGAC CAAGAAGCGT CTGCTCACCG CCCGCGTGCT GCTGATCGTG
ATCGGTGCCG GCGGCGCGCT GGTGGCGAGT ATGCAGCTCA CCGGTATCCT CGGTGCGGTG
GCCTGGGCAT TCTGCTTCGC CATGTCGGGC CTGTTCTTCC CGCTCGTGCT TGGCGTGTGG
TGGAAACGGG CCAACCGGCA GGGTGCGCTG GCAGGTATGC TGGTGGGTCT GTTCGTGGGC
TGGTGGTACC TCGTCGCGGT GCGTAACCCC GATGCCTGGT ACGGCATCTC CGCCCCGTGG
CTGGGCCTCA ACGACCTGCG CTTCGGCATC GTCGGCATCA CCGCGAGCCT GATCGCCATG
GTCGTGGTGA CCCTGCTGAC ACCTGCGCCT GATGCTGAGA CTCAGGCCAT GGTGGATGAA
GTGCGTATCC CGCGCGGCGA AACCATCATC CCTTCCAAGG GCTGA
 
Protein sequence
MGMQWEGKSF IENLPKIYGV YTGGFLAFFF LMAFFEQMGM GADTIGILFV AFTIGIYAFI 
GILSRTMAVE AYYVAGRSVP PVFNGMATAA DWMSGASFVA MAGGIFMGGH GYMAFVVGWT
GGYILVATLM APYLRKFGCY TVPDFIGTRY GGKVTRFAAI LVLVVASFTY VTAQITATGT
IAARALQIPF AVGVWFGLAG ILVCSMLGGM RAVTWTQVAQ YIVLIIAYLI PIFWMSMAQG
FGPLPQLMYG PAVERIMDLE PVIGVGTLTA QESIRGLSTL TQLHATPREG AMAAWQFVTL
VACMMIGTAS LPHILMRYFT TPSVRAARNS VAWSLFFIFL LYFSAPALAT FSKLSMIDPN
LPTAIIGQPI EAVLALDWIQ KWSAIGLLAV VDSNGDGILQ INEFYLNPDI IVLATPEMAG
LPYVISGLVA AGGMAAAMST ADGLLLAMAN ALSHDLYYKI IDPKAETKKR LLTARVLLIV
IGAGGALVAS MQLTGILGAV AWAFCFAMSG LFFPLVLGVW WKRANRQGAL AGMLVGLFVG
WWYLVAVRNP DAWYGISAPW LGLNDLRFGI VGITASLIAM VVVTLLTPAP DAETQAMVDE
VRIPRGETII PSKG