Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_1022 |
Symbol | |
ID | 7316599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 1108904 |
End bp | 1110748 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643615908 |
Product | SSF family Na(+)/solute symporter |
Protein accession | YP_002513096 |
Protein GI | 220934197 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.12655 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCATGC AATGGGAAGG TAAATCCTTC ATTGAAAACC TGCCGAAGAT CTACGGTGTG TACACCGGTG GATTCCTGGC ATTCTTTTTC CTGATGGCCT TTTTTGAACA GATGGGCATG GGCGCGGACA CCATCGGCAT CCTGTTCGTG GCGTTCACCA TCGGTATCTA TGCGTTCATC GGTATCCTGT CGAGAACCAT GGCGGTGGAG GCCTACTACG TGGCCGGACG CAGCGTGCCT CCGGTGTTCA ACGGCATGGC CACCGCGGCG GACTGGATGT CCGGTGCGTC CTTCGTGGCC ATGGCGGGCG GCATCTTCAT GGGCGGCCAT GGCTACATGG CGTTCGTGGT GGGCTGGACC GGCGGCTACA TCCTGGTGGC CACGCTGATG GCGCCGTACC TGCGCAAGTT CGGCTGCTAC ACGGTGCCGG ACTTCATCGG TACCCGCTAC GGCGGCAAGG TGACCCGCTT CGCGGCGATC CTGGTACTGG TGGTGGCTTC CTTCACCTAC GTGACCGCGC AGATCACCGC GACCGGCACC ATCGCCGCCC GCGCCCTGCA GATCCCGTTC GCCGTGGGTG TGTGGTTCGG TCTGGCAGGT ATCCTGGTGT GCTCCATGCT GGGTGGCATG CGCGCGGTGA CCTGGACCCA GGTGGCCCAG TACATCGTGC TGATCATCGC CTACCTGATC CCGATCTTCT GGATGTCCAT GGCCCAGGGC TTCGGCCCGC TGCCGCAGCT GATGTACGGC CCGGCGGTGG AGCGCATCAT GGACCTGGAG CCGGTGATCG GTGTGGGTAC CCTGACCGCC CAGGAGTCGA TACGTGGCCT GTCCACGCTG ACGCAGCTGC ACGCCACGCC GCGTGAAGGC GCCATGGCTG CCTGGCAGTT CGTGACCCTG GTGGCCTGTA TGATGATCGG TACGGCTTCC CTGCCGCACA TCCTCATGCG CTACTTCACC ACGCCCTCCG TGCGTGCTGC CCGTAACTCC GTGGCCTGGT CGCTGTTCTT CATCTTCCTG CTGTACTTCT CGGCCCCTGC TCTGGCCACG TTCAGCAAGC TGTCGATGAT CGACCCGAAC CTGCCCACGG CCATCATCGG TCAGCCCATC GAGGCTGTGC TGGCTCTGGA CTGGATCCAG AAGTGGAGCG CCATCGGCCT GCTGGCTGTT GTCGACAGTA ATGGCGACGG CATCCTGCAG ATCAACGAGT TCTACCTGAA CCCCGACATC ATCGTGCTGG CCACGCCTGA AATGGCCGGT CTGCCCTACG TGATCTCGGG TCTGGTAGCC GCGGGTGGTA TGGCTGCCGC CATGTCCACC GCCGACGGTC TGCTGCTGGC CATGGCCAAC GCCCTGTCCC ACGATCTGTA CTACAAGATC ATCGACCCGA AGGCGGAGAC CAAGAAGCGT CTGCTCACCG CCCGCGTGCT GCTGATCGTG ATCGGTGCCG GCGGCGCGCT GGTGGCGAGT ATGCAGCTCA CCGGTATCCT CGGTGCGGTG GCCTGGGCAT TCTGCTTCGC CATGTCGGGC CTGTTCTTCC CGCTCGTGCT TGGCGTGTGG TGGAAACGGG CCAACCGGCA GGGTGCGCTG GCAGGTATGC TGGTGGGTCT GTTCGTGGGC TGGTGGTACC TCGTCGCGGT GCGTAACCCC GATGCCTGGT ACGGCATCTC CGCCCCGTGG CTGGGCCTCA ACGACCTGCG CTTCGGCATC GTCGGCATCA CCGCGAGCCT GATCGCCATG GTCGTGGTGA CCCTGCTGAC ACCTGCGCCT GATGCTGAGA CTCAGGCCAT GGTGGATGAA GTGCGTATCC CGCGCGGCGA AACCATCATC CCTTCCAAGG GCTGA
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Protein sequence | MGMQWEGKSF IENLPKIYGV YTGGFLAFFF LMAFFEQMGM GADTIGILFV AFTIGIYAFI GILSRTMAVE AYYVAGRSVP PVFNGMATAA DWMSGASFVA MAGGIFMGGH GYMAFVVGWT GGYILVATLM APYLRKFGCY TVPDFIGTRY GGKVTRFAAI LVLVVASFTY VTAQITATGT IAARALQIPF AVGVWFGLAG ILVCSMLGGM RAVTWTQVAQ YIVLIIAYLI PIFWMSMAQG FGPLPQLMYG PAVERIMDLE PVIGVGTLTA QESIRGLSTL TQLHATPREG AMAAWQFVTL VACMMIGTAS LPHILMRYFT TPSVRAARNS VAWSLFFIFL LYFSAPALAT FSKLSMIDPN LPTAIIGQPI EAVLALDWIQ KWSAIGLLAV VDSNGDGILQ INEFYLNPDI IVLATPEMAG LPYVISGLVA AGGMAAAMST ADGLLLAMAN ALSHDLYYKI IDPKAETKKR LLTARVLLIV IGAGGALVAS MQLTGILGAV AWAFCFAMSG LFFPLVLGVW WKRANRQGAL AGMLVGLFVG WWYLVAVRNP DAWYGISAPW LGLNDLRFGI VGITASLIAM VVVTLLTPAP DAETQAMVDE VRIPRGETII PSKG
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