Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_1007 |
Symbol | |
ID | 7316584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 1088582 |
End bp | 1090663 |
Gene Length | 2082 bp |
Protein Length | 693 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643615894 |
Product | polynucleotide phosphorylase/polyadenylase |
Protein accession | YP_002513082 |
Protein GI | 220934183 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0328519 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACAGCCA TCAAGAAGTC CTTCCAGTAC GGTCAGCATA CCGTCACCTT CGAAACCGGA GAGATTGCGC GCCAGGCCAG CGGCGCGGTC CTGGTCAACA TGGCCGACAC CGTGGTGCTG GTCACCGCCG TGGGTCTGAA GGACGTGGCG CAGGGCCGGG ACTTCTTCCC GCTGACGGTG AACTACCAGG AACGCACCTA TGCCGCGGGT CGCATCCCCG GCGGGTTCTT CAAGCGTGAG GGTCGTCCCA CCGAGAAGGA GACCCTGACC TCCCGGCTGA TCGACCGTCC TATCCGGCCG CTGTTCCCGA AGGGCTTCAT GAACGAGGTG CAGGTCATCG CCACGGTGAT GTCCATGAAC CCCGAGGTGG ATCCCGACGT CCCGGCCATG CTGGGCGCCT CCGCTGCCCT GGCCCTGTCC GGCCTGCCCT TCAAGGGCCC CATCGGTGCC GCCCGCGTGG GTTACCTGAA TGGCGCCTAC GTGCTCAATC CGAGCATGTC CGAACTCAAG CACTCCGATC TGGACCTGGT GGTCGCCGGC ACCGAGAAGG CCGTGCTCAT GGTGGAGTCC GAGGCGAAGC TGCTCTCCGA GGAGGTCATG CTGGGCGCGG TGATGTACGG CCATGAGCAG ATGCAGGCCG CCATCAAGGT GATCAACGAA CTGGCCGCCG AGGCCGGCAA GCCCGCCTGG GACTGGGTCG CGCCGGAAGA GAACGTGGCG CTCAAGGAAG CCGTGGCCGC CGCCTGCGAG GCGGAGCTGA CCGCCGCCTA CCAGATCGCC GAGAAGCAGG CCCGTAACCA GCAGGTCAAC GCCCTGCGCG ATGCCGTGGT CGCCAAGCTG GCCACCGGCG AGGAGGGCGC GCCCTCCGCC GAGAAGGTCA AGGGTGCCTT CGGCGCCCTG GAAAAACGCA TCGTGCGCAG CCGGGTGCTC AAGGGCGAGC CCCGCATCGA CGGACGCGAC ACCCGCACCG TGCGCCCGAT CACCGTCAAG ACCGGCGTGC TGCCGCGCAC CCATGGTTCC GCCCTGTTCA CCCGTGGCGA GACCCAGGCC ATCGTGGTGG CCACCCTGGG CACGGATCGC GATGCCCAGC TGATCGAGGC CATCGAGGGT GAGCGCCGCG AGCGATTCAT GCTGCACTAC AACTTCCCCC CCTTCTGCAC CGGTGAGACC GGCATGGTGG GTTCGCCCAA GCGCCGCGAG ATCGGTCACG GCCGTCTGGC CAAGCGCGGT GTGCAGGCCG TGATGCCCGG CGAGGCGGAA TGCCCCTACG TGCTGCGCGT GGTCTCCGAG ATCACCGAGT CCAACGGTTC CAGCTCCATG GCCTCCGTGT GCGGCACCAG CCTGGCCCTG ATGGACGCCG GCGTGCCCCT GAAGGCCCCC GTGGCCGGTA TCGCCATGGG CCTGATCAAG GAAGGCGACG CCTTCGCCGT GATCTCCGAC ATCCTGGGTG ACGAGGATCA CCTGGGCGAC ATGGACTTCA AGGTGGCCGG CAGCAAGGAC GGTGTGTCCG CCCTGCAGAT GGACATCAAG ATCGATGGTA TCACCCGCGA GATCATGGAA AAGGCCCTGG CCCAGGCGAA GGAAGGCCGT CTGCACATCC TGGAAAAGAT GAACGCGGTG CTCAGCGAGC CCCGCACGGA GGTGTCCGCC TACGCGCCGC GCTTCACCAC CCTCAAGATC CATCCGGACA AGATCCGCGA CGTGATCGGC AAGGGCGGCG CCACGATCCG CGCCCTGACC GAAGAGACCG GCACCAGCAT CGATATCTCC GACGACGGTA CCGTGAAGAT CGCCTCCGTG GACAAGGCCG CCGGTGATGA GGCCCGCCGC CGCATCGAGG AGCTCACCGC CGACGTGGAA GTGGGCCGCA TCTACGAGGG CCGCGTGGTC AAGATCATGG ACTTCGGCGC CTTCGTCACC ATCCTGCCCG GCCGCGACGG TCTGGTGCAC ATCTCCCAGA TCTCCGAAGA GCGGGTGGAG AGTGTCTCCG ACCGCCTGAC CGAGGGGGAT CTGGTGAAGG TGAAGGTGCT GGAAGTGGAT AAGCAGGGGC GTATTCGTCT CAGCATGAAG GAAGTTGGCT GA
|
Protein sequence | MTAIKKSFQY GQHTVTFETG EIARQASGAV LVNMADTVVL VTAVGLKDVA QGRDFFPLTV NYQERTYAAG RIPGGFFKRE GRPTEKETLT SRLIDRPIRP LFPKGFMNEV QVIATVMSMN PEVDPDVPAM LGASAALALS GLPFKGPIGA ARVGYLNGAY VLNPSMSELK HSDLDLVVAG TEKAVLMVES EAKLLSEEVM LGAVMYGHEQ MQAAIKVINE LAAEAGKPAW DWVAPEENVA LKEAVAAACE AELTAAYQIA EKQARNQQVN ALRDAVVAKL ATGEEGAPSA EKVKGAFGAL EKRIVRSRVL KGEPRIDGRD TRTVRPITVK TGVLPRTHGS ALFTRGETQA IVVATLGTDR DAQLIEAIEG ERRERFMLHY NFPPFCTGET GMVGSPKRRE IGHGRLAKRG VQAVMPGEAE CPYVLRVVSE ITESNGSSSM ASVCGTSLAL MDAGVPLKAP VAGIAMGLIK EGDAFAVISD ILGDEDHLGD MDFKVAGSKD GVSALQMDIK IDGITREIME KALAQAKEGR LHILEKMNAV LSEPRTEVSA YAPRFTTLKI HPDKIRDVIG KGGATIRALT EETGTSIDIS DDGTVKIASV DKAAGDEARR RIEELTADVE VGRIYEGRVV KIMDFGAFVT ILPGRDGLVH ISQISEERVE SVSDRLTEGD LVKVKVLEVD KQGRIRLSMK EVG
|
| |