Gene Tgr7_1007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1007 
Symbol 
ID7316584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp1088582 
End bp1090663 
Gene Length2082 bp 
Protein Length693 aa 
Translation table11 
GC content66% 
IMG OID643615894 
Productpolynucleotide phosphorylase/polyadenylase 
Protein accessionYP_002513082 
Protein GI220934183 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) 
TIGRFAM ID[TIGR03591] polyribonucleotide nucleotidyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0328519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACAGCCA TCAAGAAGTC CTTCCAGTAC GGTCAGCATA CCGTCACCTT CGAAACCGGA 
GAGATTGCGC GCCAGGCCAG CGGCGCGGTC CTGGTCAACA TGGCCGACAC CGTGGTGCTG
GTCACCGCCG TGGGTCTGAA GGACGTGGCG CAGGGCCGGG ACTTCTTCCC GCTGACGGTG
AACTACCAGG AACGCACCTA TGCCGCGGGT CGCATCCCCG GCGGGTTCTT CAAGCGTGAG
GGTCGTCCCA CCGAGAAGGA GACCCTGACC TCCCGGCTGA TCGACCGTCC TATCCGGCCG
CTGTTCCCGA AGGGCTTCAT GAACGAGGTG CAGGTCATCG CCACGGTGAT GTCCATGAAC
CCCGAGGTGG ATCCCGACGT CCCGGCCATG CTGGGCGCCT CCGCTGCCCT GGCCCTGTCC
GGCCTGCCCT TCAAGGGCCC CATCGGTGCC GCCCGCGTGG GTTACCTGAA TGGCGCCTAC
GTGCTCAATC CGAGCATGTC CGAACTCAAG CACTCCGATC TGGACCTGGT GGTCGCCGGC
ACCGAGAAGG CCGTGCTCAT GGTGGAGTCC GAGGCGAAGC TGCTCTCCGA GGAGGTCATG
CTGGGCGCGG TGATGTACGG CCATGAGCAG ATGCAGGCCG CCATCAAGGT GATCAACGAA
CTGGCCGCCG AGGCCGGCAA GCCCGCCTGG GACTGGGTCG CGCCGGAAGA GAACGTGGCG
CTCAAGGAAG CCGTGGCCGC CGCCTGCGAG GCGGAGCTGA CCGCCGCCTA CCAGATCGCC
GAGAAGCAGG CCCGTAACCA GCAGGTCAAC GCCCTGCGCG ATGCCGTGGT CGCCAAGCTG
GCCACCGGCG AGGAGGGCGC GCCCTCCGCC GAGAAGGTCA AGGGTGCCTT CGGCGCCCTG
GAAAAACGCA TCGTGCGCAG CCGGGTGCTC AAGGGCGAGC CCCGCATCGA CGGACGCGAC
ACCCGCACCG TGCGCCCGAT CACCGTCAAG ACCGGCGTGC TGCCGCGCAC CCATGGTTCC
GCCCTGTTCA CCCGTGGCGA GACCCAGGCC ATCGTGGTGG CCACCCTGGG CACGGATCGC
GATGCCCAGC TGATCGAGGC CATCGAGGGT GAGCGCCGCG AGCGATTCAT GCTGCACTAC
AACTTCCCCC CCTTCTGCAC CGGTGAGACC GGCATGGTGG GTTCGCCCAA GCGCCGCGAG
ATCGGTCACG GCCGTCTGGC CAAGCGCGGT GTGCAGGCCG TGATGCCCGG CGAGGCGGAA
TGCCCCTACG TGCTGCGCGT GGTCTCCGAG ATCACCGAGT CCAACGGTTC CAGCTCCATG
GCCTCCGTGT GCGGCACCAG CCTGGCCCTG ATGGACGCCG GCGTGCCCCT GAAGGCCCCC
GTGGCCGGTA TCGCCATGGG CCTGATCAAG GAAGGCGACG CCTTCGCCGT GATCTCCGAC
ATCCTGGGTG ACGAGGATCA CCTGGGCGAC ATGGACTTCA AGGTGGCCGG CAGCAAGGAC
GGTGTGTCCG CCCTGCAGAT GGACATCAAG ATCGATGGTA TCACCCGCGA GATCATGGAA
AAGGCCCTGG CCCAGGCGAA GGAAGGCCGT CTGCACATCC TGGAAAAGAT GAACGCGGTG
CTCAGCGAGC CCCGCACGGA GGTGTCCGCC TACGCGCCGC GCTTCACCAC CCTCAAGATC
CATCCGGACA AGATCCGCGA CGTGATCGGC AAGGGCGGCG CCACGATCCG CGCCCTGACC
GAAGAGACCG GCACCAGCAT CGATATCTCC GACGACGGTA CCGTGAAGAT CGCCTCCGTG
GACAAGGCCG CCGGTGATGA GGCCCGCCGC CGCATCGAGG AGCTCACCGC CGACGTGGAA
GTGGGCCGCA TCTACGAGGG CCGCGTGGTC AAGATCATGG ACTTCGGCGC CTTCGTCACC
ATCCTGCCCG GCCGCGACGG TCTGGTGCAC ATCTCCCAGA TCTCCGAAGA GCGGGTGGAG
AGTGTCTCCG ACCGCCTGAC CGAGGGGGAT CTGGTGAAGG TGAAGGTGCT GGAAGTGGAT
AAGCAGGGGC GTATTCGTCT CAGCATGAAG GAAGTTGGCT GA
 
Protein sequence
MTAIKKSFQY GQHTVTFETG EIARQASGAV LVNMADTVVL VTAVGLKDVA QGRDFFPLTV 
NYQERTYAAG RIPGGFFKRE GRPTEKETLT SRLIDRPIRP LFPKGFMNEV QVIATVMSMN
PEVDPDVPAM LGASAALALS GLPFKGPIGA ARVGYLNGAY VLNPSMSELK HSDLDLVVAG
TEKAVLMVES EAKLLSEEVM LGAVMYGHEQ MQAAIKVINE LAAEAGKPAW DWVAPEENVA
LKEAVAAACE AELTAAYQIA EKQARNQQVN ALRDAVVAKL ATGEEGAPSA EKVKGAFGAL
EKRIVRSRVL KGEPRIDGRD TRTVRPITVK TGVLPRTHGS ALFTRGETQA IVVATLGTDR
DAQLIEAIEG ERRERFMLHY NFPPFCTGET GMVGSPKRRE IGHGRLAKRG VQAVMPGEAE
CPYVLRVVSE ITESNGSSSM ASVCGTSLAL MDAGVPLKAP VAGIAMGLIK EGDAFAVISD
ILGDEDHLGD MDFKVAGSKD GVSALQMDIK IDGITREIME KALAQAKEGR LHILEKMNAV
LSEPRTEVSA YAPRFTTLKI HPDKIRDVIG KGGATIRALT EETGTSIDIS DDGTVKIASV
DKAAGDEARR RIEELTADVE VGRIYEGRVV KIMDFGAFVT ILPGRDGLVH ISQISEERVE
SVSDRLTEGD LVKVKVLEVD KQGRIRLSMK EVG