| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0999 |
|---|
| Symbol | |
|---|
| ID | 7316575 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 1079616 |
|---|
| End bp | 1081058 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643615885 |
|---|
| Product | NADH dehydrogenase subunit N |
|---|
| Protein accession | YP_002513074 |
|---|
| Protein GI | 220934175 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) |
|---|
| TIGRFAM ID | [TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTCG AGATCCCAGA CTTCATGCCC GTGATCCCCG AGCTGTTCGT GCTCGGGATG
GCCTGCGCCA TTCTCGTGAT CGACCTGTTC GTGCCCCAGT CGCGCCGGGA CATCACCTAC
GGGCTGTCCC AGTTCACCCT GATCGGCGCG GCAATCCTGA CCATCGCCCT GGCGAGCCCC
GAGACCCGCT TCACCTTCAA CGACACCTTC ATCGCCGACG GGCTCTCGGA CCTGCTCAAG
GTGGCGGTGT ATCTCATCAC CGCGGTGGTG TTCCTGTATT CCCGTCCCTA CCTGCAGGAC
CGGGACATCT ACAAGGGGGA GTACTACGTG CTCGGCCTGT TCGGCGTGCT GGGCATGATG
ATCATGATCT CCTCCTACAG CTTCCTGACC CTGTACCTGG GCCTGGAGCT GCTGTCCCTG
TCCCTGTACG CCATGGTGGC CTTCAACCGG GATTCCGCCC GGGCCTCCGA GGCGGCCATG
AAGTACTTCA TCCTGGGCGC CATCGCCTCG GGCATGCTGC TCTACGGCAT GTCCATCCTC
TACGGCATCA CCGGCAGCCT GGACATCAAG GAGGTGAGCG ATTACCTGAT CACCTCCGGC
GCCGGCCTGA ACGTGCCCCT GGTGTTTGCC CTGTCCTTCG TGATCGTGGG CCTGGCCTTC
AAGCTGGGCG CCGTGCCGTT CCACATGTGG GTGCCCGACG TCTATCACGG CGCGCCCACC
TCGGTGACCC TGTTCATCGG CACCGCCCCC AAGCTGGCGG GCCTGGCCAT CATCATGCGC
CTGCTGGTGG ACGGCCTGGG CCCCCTGCAC CACGACTGGC AGGGCATGCT CACCATCCTG
GCGGTGCTCT CCCTGGCGGT GGGCAACGTG GTGGCCATCG CCCAGACCAA CATCAAGCGC
ATGCTGGCCT ACTCGACGAT CTCCCACGTG GGCTTCATCC TCATGGGCAT CCTGGCCGGG
ACCCACGAGG GCTACGCCGC GGCGCTGTTC TACACCCTGG TGTACGCCAT CGTGGCCGCC
GGCGGCTTCG GCATGATCAT CCTGCTGTCC CGCCGGGGCT TCGAGGCGGA GAACCTGGAC
GACTTCCGGG GACTGAACGA GCGCAGCCCC TGGTTCGCCT TCATCATGCT GCTGATCATG
TTCTCCATGG CCGGCGTGCC GCCCACCGTG GGCTTTTACG CCAAGCTCGC CGTGCTGCAG
GCGGTAGTGC AGGTGGAGAT GATCTGGCTG GCCATCTTCG CGGTGATCTT CTCCATCGTC
GGCGCCTTCT ACTACCTGCG GGCGGTGAAG ATCATGTACT TCGACAAGCC CGAGGACGAA
TCCCCGCTGC CGAAGGCCCT GGATATGAAC GTGGTGCTGA GCATCAACGG TCTGCTGGTC
ATCGTACTGG GGATCTTTCC CGGCCTGCTG ATGTCTCTAG CTACCGGAGC CATCAGTTGG
TAG
|
|---|
| Protein sequence | MTFEIPDFMP VIPELFVLGM ACAILVIDLF VPQSRRDITY GLSQFTLIGA AILTIALASP
ETRFTFNDTF IADGLSDLLK VAVYLITAVV FLYSRPYLQD RDIYKGEYYV LGLFGVLGMM
IMISSYSFLT LYLGLELLSL SLYAMVAFNR DSARASEAAM KYFILGAIAS GMLLYGMSIL
YGITGSLDIK EVSDYLITSG AGLNVPLVFA LSFVIVGLAF KLGAVPFHMW VPDVYHGAPT
SVTLFIGTAP KLAGLAIIMR LLVDGLGPLH HDWQGMLTIL AVLSLAVGNV VAIAQTNIKR
MLAYSTISHV GFILMGILAG THEGYAAALF YTLVYAIVAA GGFGMIILLS RRGFEAENLD
DFRGLNERSP WFAFIMLLIM FSMAGVPPTV GFYAKLAVLQ AVVQVEMIWL AIFAVIFSIV
GAFYYLRAVK IMYFDKPEDE SPLPKALDMN VVLSINGLLV IVLGIFPGLL MSLATGAISW
|
|---|
| |