| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0993 |
|---|
| Symbol | |
|---|
| ID | 7316564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 1073423 |
|---|
| End bp | 1074487 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643615879 |
|---|
| Product | NADH dehydrogenase (quinone) |
|---|
| Protein accession | YP_002513068 |
|---|
| Protein GI | 220934169 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGAAA CCATCATGAA TGTCTGGGAA GGGTTGCCGC TGGTCATGCA GATCATGGCC
AAGATCACCC TGATCGTCGC GCCCCTGATG CTGGCGGTGG CCTACGTCAC CTACGCCGAG
CGCAAGGTGA TCGGCTACAT GCAGGTGCGC CTGGGTCCGA ACCGGGTGGG TCCCAAGGGC
TGGCTGCAGC CCATCGCCGA CGCGGTCAAG CTGCTGACCA AAGAGGTGAT CGTCCCCACC
AACGCCAACC GCTACCTGTT CCTGATCGCC CCGGTGCTGT CCATCGCCCC GGCGCTGGCG
GCCTGGGCGG TGATCCCCTT CGACGACGGC ATGGCGCTGG CCAATATAAA CGCCGGTCTG
CTGTACATCC TGGCCCTGAG TTCGCTCGGC GTGTACGGCG TGATCATTGC CGGCTGGGCG
TCCAACTCCA AGTACGCCCT GCTGGGCGCC ATGCGTTCCG CGGCCCAGAT CGTGGCCTAC
GAGATCGCCA TGGGCTTCGC CCTGGTGGGC GTGATCATGG TGGCCGGCAG CCTGAACCTG
GGCGAGATCG TCAGCGCCCA GTCCGGCAGC ATCTATCACT GGTACCTGCT GCCCCTGCTG
CCCCTGTTCC TGGTGTTCTT CATCTCCGGC GTGGCCGAGA CCAACCGCGC ACCCTTCGAC
GTGGCGGAAG GCGAGTCGGA GATCGTGGCC GGTTTCCACG TGGAGTATTC GGGCATGGCC
TTCGCCGTGT TCTTCCTGGC CGAATACGCC AACATGATCC TGATCTCGGC GCTCACCGCG
TTGCTGTTCC TGGGCGGCTG GCTGTCTCCC TTCCAGGGCA TCCTGCCGGA GTCCGCCTTT
GCGATTCCCG TGATCGGCTG GTTCCTGGAC AGCGGCATCC ACTGGTTCCT GCTCAAGACC
GCCTTCTTCC TGTTCCTGTT CCTGTGGTTC CGTGCCACCT TCCCCCGCTA TCGCTATGAC
CAGATCATGC GCCTGGGCTG GAAGGTGCTG ATCCCGGTGA CCATCGTGTG GCTGTTTGTC
CTGGGCGTGG GTGTCGCCTT CGGCATCGGC CCCTGGTTCG CGTGA
|
|---|
| Protein sequence | MLETIMNVWE GLPLVMQIMA KITLIVAPLM LAVAYVTYAE RKVIGYMQVR LGPNRVGPKG
WLQPIADAVK LLTKEVIVPT NANRYLFLIA PVLSIAPALA AWAVIPFDDG MALANINAGL
LYILALSSLG VYGVIIAGWA SNSKYALLGA MRSAAQIVAY EIAMGFALVG VIMVAGSLNL
GEIVSAQSGS IYHWYLLPLL PLFLVFFISG VAETNRAPFD VAEGESEIVA GFHVEYSGMA
FAVFFLAEYA NMILISALTA LLFLGGWLSP FQGILPESAF AIPVIGWFLD SGIHWFLLKT
AFFLFLFLWF RATFPRYRYD QIMRLGWKVL IPVTIVWLFV LGVGVAFGIG PWFA
|
|---|
| |